ECODEvolutionary Classification of Protein Domains

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PDB 6XM4

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e6xm4A1(A:27-308)e6xm4A2(A:309-328,A:530-694)e6xm4A3(A:329-529)e6xm4A4(A:695-827,A:849-1147)

Chain Bview chain

4 domains

e6xm4B1(B:695-827,B:848-1147)e6xm4B2(B:329-529)e6xm4B3(B:309-328,B:530-694)e6xm4B4(B:27-308)

Chain Cview chain

4 domains

e6xm4C1(C:329-529)e6xm4C2(C:309-328,C:530-694)e6xm4C3(C:27-308)e6xm4C4(C:695-827,C:848-1147)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xm4A1	A:27-308	bCoV_S1_N	10 → 10.1 → 10.1.1
2	A	e6xm4A2	A:309-328,A:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
3	A	e6xm4A3	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
4	A	e6xm4A4	A:695-827,A:849-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
5	B	e6xm4B1	B:695-827,B:848-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
6	B	e6xm4B2	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
7	B	e6xm4B3	B:309-328,B:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
8	B	e6xm4B4	B:27-308	bCoV_S1_N	10 → 10.1 → 10.1.1
9	C	e6xm4C1	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
10	C	e6xm4C2	C:309-328,C:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
11	C	e6xm4C3	C:27-308	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e6xm4C4	C:695-827,C:848-1147	CoV_S2	1042 → 1042.1 → 1042.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors