ECODEvolutionary Classification of Protein Domains

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PDB 6XM5

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e6xm5A1(A:329-529)e6xm5A2(A:27-308)e6xm5A3(A:695-827,A:848-1147)e6xm5A4(A:309-328,A:530-694)

Chain Bview chain

4 domains

e6xm5B1(B:309-328,B:530-694)e6xm5B2(B:27-308)e6xm5B3(B:695-827,B:848-1147)e6xm5B4(B:329-529)

Chain Cview chain

4 domains

e6xm5C1(C:309-328,C:530-694)e6xm5C2(C:695-827,C:850-1147)e6xm5C3(C:27-308)e6xm5C4(C:329-529)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xm5A1	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
2	A	e6xm5A2	A:27-308	bCoV_S1_N	10 → 10.1 → 10.1.1
3	A	e6xm5A3	A:695-827,A:848-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
4	A	e6xm5A4	A:309-328,A:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
5	B	e6xm5B1	B:309-328,B:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
6	B	e6xm5B2	B:27-308	bCoV_S1_N	10 → 10.1 → 10.1.1
7	B	e6xm5B3	B:695-827,B:848-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
8	B	e6xm5B4	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
9	C	e6xm5C1	C:309-328,C:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
10	C	e6xm5C2	C:695-827,C:850-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
11	C	e6xm5C3	C:27-308	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e6xm5C4	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors