ECODEvolutionary Classification of Protein Domains

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PDB 6XR8

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e6xr8A1(A:329-529)e6xr8A2(A:695-827,A:848-1162)e6xr8A3(A:14-308)e6xr8A4(A:309-328,A:530-694)

Chain Bview chain

4 domains

e6xr8B1(B:309-328,B:530-694)e6xr8B2(B:329-529)e6xr8B3(B:695-827,B:848-1162)e6xr8B4(B:14-308)

Chain Cview chain

4 domains

e6xr8C1(C:329-529)e6xr8C2(C:309-328,C:530-694)e6xr8C3(C:14-308)e6xr8C4(C:695-827,C:848-1162)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6xr8A1	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
2	A	e6xr8A2	A:695-827,A:848-1162	CoV_S2	1042 → 1042.1 → 1042.1.1
3	A	e6xr8A3	A:14-308	bCoV_S1_N	10 → 10.1 → 10.1.1
4	A	e6xr8A4	A:309-328,A:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
5	B	e6xr8B1	B:309-328,B:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
6	B	e6xr8B2	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
7	B	e6xr8B3	B:695-827,B:848-1162	CoV_S2	1042 → 1042.1 → 1042.1.1
8	B	e6xr8B4	B:14-308	bCoV_S1_N	10 → 10.1 → 10.1.1
9	C	e6xr8C1	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
10	C	e6xr8C2	C:309-328,C:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
11	C	e6xr8C3	C:14-308	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e6xr8C4	C:695-827,C:848-1162	CoV_S2	1042 → 1042.1 → 1042.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors