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PDB 6Y11

X-RAY DIFFRACTION3.10 Å0 chains54 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (54)

#ChainDomain IDRangeFamilyClassification
11e6y11111:2-249Complex1_51K4335 → 4335.1 → 4335.1.1
21e6y11121:334-438NADH_4Fe-4S633 → 633.11 → 633.11.1
31e6y11131:250-333SLBB221 → 221.1 → 221.1.4
42e6y11212:75-1802Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
52e6y11222:3-742Fe-2S_thioredx3697 → 3697.1 → 3697.1.1
63e6y11313:162-246Nqo3_Fer4205 → 205.1 → 205.1.1
73e6y11323:375-5412003.2.1.02003 → 2003.2 → 2003.2.1
83e6y11333:686-777Molydop_binding1 → 1.1 → 1.1.2
93e6y11343:1-95Fer2_4221 → 221.1 → 221.1.1
103e6y11353:247-304Molybdop_Fe4S41001 → 1001.1 → 1001.1.1
113e6y11363:96-161NADH-G_4Fe-4S_35100 → 5100.1 → 5100.1.1
123e6y11373:305-379,3:542-685Molybdopterin2003 → 2003.2 → 2003.2.1
134e6y11414:26-63,4:378-409Complex1_49kDa244 → 244.4 → 244.4.1
144e6y11424:107-304Complex1_49kDa4025 → 4025.1 → 4025.1.1
154e6y11434:64-106,4:305-377Complex1_49kDa244 → 244.4 → 244.4.1
165e6y11515:1-196Complex1_30kDa4272 → 4272.1 → 4272.1.1
176e6y11616:16-181Oxidored_q62007 → 2007.1 → 2007.1.3
187e6y11717:3-129NADH_Oxid_Nqo15241 → 241.2 → 241.2.1
199e6y11919:25-181Fer4+Fer4_7205 → 205.1 → 205.1.1
20Ae6y11A1A:1-117Oxidored_q43456 → 3456.1 → 3456.1.1
21Be6y11B1B:334-438NADH_4Fe-4S633 → 633.11 → 633.11.1
22Be6y11B2B:2-249Complex1_51K4335 → 4335.1 → 4335.1.1
23Be6y11B3B:250-333SLBB221 → 221.1 → 221.1.4
24Ce6y11C1C:3-742Fe-2S_thioredx3697 → 3697.1 → 3697.1.1
25Ce6y11C2C:75-1802Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
26De6y11D1D:96-161NADH-G_4Fe-4S_35100 → 5100.1 → 5100.1.1
27De6y11D2D:162-246Nqo3_Fer4205 → 205.1 → 205.1.1
28De6y11D3D:305-379,D:542-685Molybdopterin2003 → 2003.2 → 2003.2.1
29De6y11D4D:247-304Molybdop_Fe4S41001 → 1001.1 → 1001.1.1
30De6y11D5D:686-777Molydop_binding1 → 1.1 → 1.1.2
31De6y11D6D:375-5412003.2.1.02003 → 2003.2 → 2003.2.1
32De6y11D7D:1-95Fer2_4221 → 221.1 → 221.1.1
33Ee6y11E1E:107-304Complex1_49kDa4025 → 4025.1 → 4025.1.1
34Ee6y11E2E:64-106,E:305-377Complex1_49kDa244 → 244.4 → 244.4.1
35Ee6y11E3E:26-63,E:378-409Complex1_49kDa244 → 244.4 → 244.4.1
36Fe6y11F1F:1-196Complex1_30kDa4272 → 4272.1 → 4272.1.1
37Ge6y11G1G:16-181Oxidored_q62007 → 2007.1 → 2007.1.3
38He6y11H1H:2-354NADHdh3281 → 3281.1 → 3281.1.2
39Ie6y11I1I:3-129NADH_Oxid_Nqo15241 → 241.2 → 241.2.1
40Je6y11J1J:1-160Oxidored_q33579 → 3579.1 → 3579.1.1
41Ke6y11K1K:1-95Oxidored_q23843 → 3843.1 → 3843.1.1
42Le6y11L1L:1-605Proton_antipo_M,Proton_antipo_N3281 → 3281.1 → 3281.1.1
43Me6y11M1M:1-467Proton_antipo_M3281 → 3281.1 → 3281.1.1
44Ne6y11N1N:1-427Proton_antipo_M3281 → 3281.1 → 3281.1.1
45Oe6y11O1O:25-181Fer4+Fer4_7205 → 205.1 → 205.1.1
46Pe6y11P1P:1-117Oxidored_q43456 → 3456.1 → 3456.1.1
47Qe6y11Q1Q:2-354NADHdh3281 → 3281.1 → 3281.1.2
48Re6y11R1R:1-160Oxidored_q33579 → 3579.1 → 3579.1.1
49Se6y11S1S:1-95Oxidored_q23843 → 3843.1 → 3843.1.1
50Te6y11T1T:1-605Proton_antipo_M,Proton_antipo_N3281 → 3281.1 → 3281.1.1
51Ue6y11U1U:1-467Proton_antipo_M3281 → 3281.1 → 3281.1.1
52Ve6y11V1V:1-427Proton_antipo_M3281 → 3281.1 → 3281.1.1
53We6y11W1W:1-127DUF31974263 → 4263.1 → 4263.1.1
54Xe6y11X1X:1-127DUF31974263 → 4263.1 → 4263.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors