PDB 6Y11
X-RAY DIFFRACTION3.10 Å0 chains54 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 1view chain
3 domainsChain 2view chain
2 domainsChain 3view chain
7 domainsChain 5view chain
1 domainChain 6view chain
1 domainChain 7view chain
1 domainChain 9view chain
1 domainChain Aview chain
1 domainChain Bview chain
3 domainsChain Cview chain
2 domainsChain Dview chain
7 domainsChain Fview chain
1 domainChain Gview chain
1 domainChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
1 domainChain Pview chain
1 domainChain Qview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainChain Uview chain
1 domainChain Vview chain
1 domainChain Wview chain
1 domainChain Xview chain
1 domainAll Domains (54)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e6y1111 | 1:2-249 | Complex1_51K | 4335 → 4335.1 → 4335.1.1 |
| 2 | 1 | e6y1112 | 1:334-438 | NADH_4Fe-4S | 633 → 633.11 → 633.11.1 |
| 3 | 1 | e6y1113 | 1:250-333 | SLBB | 221 → 221.1 → 221.1.4 |
| 4 | 2 | e6y1121 | 2:75-180 | 2Fe-2S_thioredx | 2485 → 2485.1 → 2485.1.1 |
| 5 | 2 | e6y1122 | 2:3-74 | 2Fe-2S_thioredx | 3697 → 3697.1 → 3697.1.1 |
| 6 | 3 | e6y1131 | 3:162-246 | Nqo3_Fer4 | 205 → 205.1 → 205.1.1 |
| 7 | 3 | e6y1132 | 3:375-541 | 2003.2.1.0 | 2003 → 2003.2 → 2003.2.1 |
| 8 | 3 | e6y1133 | 3:686-777 | Molydop_binding | 1 → 1.1 → 1.1.2 |
| 9 | 3 | e6y1134 | 3:1-95 | Fer2_4 | 221 → 221.1 → 221.1.1 |
| 10 | 3 | e6y1135 | 3:247-304 | Molybdop_Fe4S4 | 1001 → 1001.1 → 1001.1.1 |
| 11 | 3 | e6y1136 | 3:96-161 | NADH-G_4Fe-4S_3 | 5100 → 5100.1 → 5100.1.1 |
| 12 | 3 | e6y1137 | 3:305-379,3:542-685 | Molybdopterin | 2003 → 2003.2 → 2003.2.1 |
| 13 | 4 | e6y1141 | 4:26-63,4:378-409 | Complex1_49kDa | 244 → 244.4 → 244.4.1 |
| 14 | 4 | e6y1142 | 4:107-304 | Complex1_49kDa | 4025 → 4025.1 → 4025.1.1 |
| 15 | 4 | e6y1143 | 4:64-106,4:305-377 | Complex1_49kDa | 244 → 244.4 → 244.4.1 |
| 16 | 5 | e6y1151 | 5:1-196 | Complex1_30kDa | 4272 → 4272.1 → 4272.1.1 |
| 17 | 6 | e6y1161 | 6:16-181 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 18 | 7 | e6y1171 | 7:3-129 | NADH_Oxid_Nqo15 | 241 → 241.2 → 241.2.1 |
| 19 | 9 | e6y1191 | 9:25-181 | Fer4+Fer4_7 | 205 → 205.1 → 205.1.1 |
| 20 | A | e6y11A1 | A:1-117 | Oxidored_q4 | 3456 → 3456.1 → 3456.1.1 |
| 21 | B | e6y11B1 | B:334-438 | NADH_4Fe-4S | 633 → 633.11 → 633.11.1 |
| 22 | B | e6y11B2 | B:2-249 | Complex1_51K | 4335 → 4335.1 → 4335.1.1 |
| 23 | B | e6y11B3 | B:250-333 | SLBB | 221 → 221.1 → 221.1.4 |
| 24 | C | e6y11C1 | C:3-74 | 2Fe-2S_thioredx | 3697 → 3697.1 → 3697.1.1 |
| 25 | C | e6y11C2 | C:75-180 | 2Fe-2S_thioredx | 2485 → 2485.1 → 2485.1.1 |
| 26 | D | e6y11D1 | D:96-161 | NADH-G_4Fe-4S_3 | 5100 → 5100.1 → 5100.1.1 |
| 27 | D | e6y11D2 | D:162-246 | Nqo3_Fer4 | 205 → 205.1 → 205.1.1 |
| 28 | D | e6y11D3 | D:305-379,D:542-685 | Molybdopterin | 2003 → 2003.2 → 2003.2.1 |
| 29 | D | e6y11D4 | D:247-304 | Molybdop_Fe4S4 | 1001 → 1001.1 → 1001.1.1 |
| 30 | D | e6y11D5 | D:686-777 | Molydop_binding | 1 → 1.1 → 1.1.2 |
| 31 | D | e6y11D6 | D:375-541 | 2003.2.1.0 | 2003 → 2003.2 → 2003.2.1 |
| 32 | D | e6y11D7 | D:1-95 | Fer2_4 | 221 → 221.1 → 221.1.1 |
| 33 | E | e6y11E1 | E:107-304 | Complex1_49kDa | 4025 → 4025.1 → 4025.1.1 |
| 34 | E | e6y11E2 | E:64-106,E:305-377 | Complex1_49kDa | 244 → 244.4 → 244.4.1 |
| 35 | E | e6y11E3 | E:26-63,E:378-409 | Complex1_49kDa | 244 → 244.4 → 244.4.1 |
| 36 | F | e6y11F1 | F:1-196 | Complex1_30kDa | 4272 → 4272.1 → 4272.1.1 |
| 37 | G | e6y11G1 | G:16-181 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 38 | H | e6y11H1 | H:2-354 | NADHdh | 3281 → 3281.1 → 3281.1.2 |
| 39 | I | e6y11I1 | I:3-129 | NADH_Oxid_Nqo15 | 241 → 241.2 → 241.2.1 |
| 40 | J | e6y11J1 | J:1-160 | Oxidored_q3 | 3579 → 3579.1 → 3579.1.1 |
| 41 | K | e6y11K1 | K:1-95 | Oxidored_q2 | 3843 → 3843.1 → 3843.1.1 |
| 42 | L | e6y11L1 | L:1-605 | Proton_antipo_M,Proton_antipo_N | 3281 → 3281.1 → 3281.1.1 |
| 43 | M | e6y11M1 | M:1-467 | Proton_antipo_M | 3281 → 3281.1 → 3281.1.1 |
| 44 | N | e6y11N1 | N:1-427 | Proton_antipo_M | 3281 → 3281.1 → 3281.1.1 |
| 45 | O | e6y11O1 | O:25-181 | Fer4+Fer4_7 | 205 → 205.1 → 205.1.1 |
| 46 | P | e6y11P1 | P:1-117 | Oxidored_q4 | 3456 → 3456.1 → 3456.1.1 |
| 47 | Q | e6y11Q1 | Q:2-354 | NADHdh | 3281 → 3281.1 → 3281.1.2 |
| 48 | R | e6y11R1 | R:1-160 | Oxidored_q3 | 3579 → 3579.1 → 3579.1.1 |
| 49 | S | e6y11S1 | S:1-95 | Oxidored_q2 | 3843 → 3843.1 → 3843.1.1 |
| 50 | T | e6y11T1 | T:1-605 | Proton_antipo_M,Proton_antipo_N | 3281 → 3281.1 → 3281.1.1 |
| 51 | U | e6y11U1 | U:1-467 | Proton_antipo_M | 3281 → 3281.1 → 3281.1.1 |
| 52 | V | e6y11V1 | V:1-427 | Proton_antipo_M | 3281 → 3281.1 → 3281.1.1 |
| 53 | W | e6y11W1 | W:1-127 | DUF3197 | 4263 → 4263.1 → 4263.1.1 |
| 54 | X | e6y11X1 | X:1-127 | DUF3197 | 4263 → 4263.1 → 4263.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors