PDB 6YLH
ELECTRON MICROSCOPY0 chains71 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (71)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e6ylh01 | 0:1-405,0:431-489 | WD40, ANAPC4_WD40 | 5 → 5.1 → 5.1.5 |
| 2 | 4 | e6ylh41 | 4:15-109,4:129-260,4:298-326,4:463-465,4:500-558 | Peptidase_M24 | 283 → 283.1 → 283.1.1 |
| 3 | 4 | e6ylh42 | 4:327-328,4:349-394,4:416-441 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 4 | a | e6ylha1 | a:57-149 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 5 | A | e6ylhA1 | A:2-98 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 6 | A | e6ylhA2 | A:99-246 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 7 | b | e6ylhb1 | b:165-347 | MMR_HSR1, NOG1 | 2004 → 2004.1 → 2004.1.1 |
| 8 | b | e6ylhb2 | b:1-164 | NOG1_N | 601 → 601.30 → 601.30.1 |
| 9 | B | e6ylhB1 | B:2-387 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 10 | C | e6ylhC1 | C:270-362 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 11 | C | e6ylhC2 | C:2-269 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 12 | d | e6ylhd1 | d:6-110 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 13 | D | e6ylhD1 | D:9-116,D:142-276 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 14 | e | e6ylhe1 | e:2-128 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 15 | E | e6ylhE1 | E:2-109,E:129-176 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 16 | f | e6ylhf1 | f:2-107 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 17 | F | e6ylhF1 | F:29-244 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 18 | g | e6ylhg1 | g:2-108 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 19 | G | e6ylhG1 | G:24-251 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 20 | h | e6ylhh1 | h:2-120 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 21 | H | e6ylhH1 | H:86-187 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 22 | H | e6ylhH2 | H:1-85 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 23 | i | e6ylhi1 | i:3-98 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 24 | I | e6ylhI1 | I:2-131 | zf-C2H2_jaz | 386 → 386.1 → 386.1.1 |
| 25 | j | e6ylhj1 | j:2-85 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 26 | J | e6ylhJ1 | J:6-173 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 27 | k | e6ylhk1 | k:2-78 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 28 | l | e6ylhl1 | l:2-50 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 29 | L | e6ylhL1 | L:10-190 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 30 | M | e6ylhM1 | M:2-135 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 31 | n | e6ylhn1 | n:9-105 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 32 | N | e6ylhN1 | N:2-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 33 | o | e6ylho1 | o:57-152 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 34 | o | e6ylho2 | o:6-56,o:153-215 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 35 | O | e6ylhO1 | O:3-199 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 36 | p | e6ylhp1 | p:2-90 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 37 | P | e6ylhP1 | P:2-182 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 38 | q | e6ylhq1 | q:11-73 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 39 | q | e6ylhq2 | q:74-164 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 40 | Q | e6ylhQ1 | Q:2-145 | Ribosomal_L27A, Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 41 | R | e6ylhR1 | R:57-152 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 42 | R | e6ylhR2 | R:2-56 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 43 | s | e6ylhs1 | s:177-449 | MMR_HSR1 | 2004 → 2004.1 → 2004.1.1 |
| 44 | S | e6ylhS1 | S:2-69 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 45 | S | e6ylhS2 | S:70-172 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 46 | t | e6ylht1 | t:84-318,t:340-576,t:629-700 | 109.4.1.78 | 109 → 109.4 → 109.4.1 |
| 47 | T | e6ylhT1 | T:26-153 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 48 | u | e6ylhu1 | u:1-63 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 49 | U | e6ylhU1 | U:12-112 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
| 50 | v | e6ylhv1 | v:622-909 | 2004.1.1.2 | 2004 → 2004.1 → 2004.1.1 |
| 51 | v | e6ylhv2 | v:1222-1323,v:1344-1351 | AAA_lid_7 | 148 → 148.1 → 148.1.3 |
| 52 | v | e6ylhv3 | v:1902-1988,v:2028-2032 | AAA_lid_7 | 148 → 148.1 → 148.1.3 |
| 53 | v | e6ylhv4 | v:1564-1663 | MDN1_4th | 148 → 148.1 → 148.1.3 |
| 54 | v | e6ylhv5 | v:1349-1567 | AAA_5, AAA_7 | 2004 → 2004.1 → 2004.1.1 |
| 55 | v | e6ylhv6 | v:2033-2290 | AAA_5 | 2004 → 2004.1 → 2004.1.1 |
| 56 | v | e6ylhv7 | v:1055-1221 | AAA_5 | 2004 → 2004.1 → 2004.1.1 |
| 57 | v | e6ylhv8 | v:1664-1684,v:1720-1901 | AAA_5 | 2004 → 2004.1 → 2004.1.1 |
| 58 | v | e6ylhv9 | v:287-464 | AAA_5, AAA_7 | 2004 → 2004.1 → 2004.1.1 |
| 59 | v | e6ylhv10 | v:465-621 | AAA_lid_7 | 148 → 148.1 → 148.1.3 |
| 60 | v | e6ylhv11 | v:2291-2416 | 148.1.3.0 | 148 → 148.1 → 148.1.3 |
| 61 | v | e6ylhv12 | v:910-1024 | AAA_lid_5 | 148 → 148.1 → 148.1.3 |
| 62 | V | e6ylhV1 | V:4-137 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 63 | w | e6ylhw1 | w:1-229,w:249-403,w:431-489 | WD40, ANAPC4_WD40 | 5 → 5.1 → 5.1.5 |
| 64 | W | e6ylhW1 | W:121-211 | RL10P_insert | 3310 → 3310.1 → 3310.1.1 |
| 65 | W | e6ylhW2 | W:2-120,W:212-234 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 66 | x | e6ylhx1 | x:127-515 | WD40, eIF2A, ANAPC4_WD40 | 5 → 5.1 → 5.1.5 |
| 67 | x | e6ylhx2 | x:28-126 | NLE | 221 → 221.1 → 221.1.1 |
| 68 | X | e6ylhX1 | X:2-141 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 69 | y | e6ylhy1 | y:2-244 | eIF-6 | 232 → 232.1 → 232.1.1 |
| 70 | Y | e6ylhY1 | Y:2-126 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 71 | Z | e6ylhZ1 | Z:2-136 | Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors