PDB 6Z9Q
ELECTRON MICROSCOPY0 chains50 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
3 domainsChain Aview chain
6 domainsChain bview chain
3 domainsChain cview chain
3 domainsChain dview chain
3 domainsChain eview chain
3 domainsChain fview chain
3 domainsChain Gview chain
1 domainChain Uview chain
2 domainsChain Wview chain
1 domainChain Xview chain
10 domainsAll Domains (50)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e6z9qa1 | a:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 2 | a | e6z9qa2 | a:129-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 3 | a | e6z9qa3 | a:48-128 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 4 | A | e6z9qA1 | A:279-346 | KH_NusA_2nd | 327 → 327.11 → 327.11.1 |
| 5 | A | e6z9qA2 | A:1-127 | NusA_N | 885 → 885.1 → 885.1.1 |
| 6 | A | e6z9qA3 | A:345-422 | 102.1.1.0 | 102 → 102.1 → 102.1.1 |
| 7 | A | e6z9qA4 | A:126-199 | S1 | 2 → 2.1 → 2.1.1 |
| 8 | A | e6z9qA5 | A:423-495 | HHH_5 | 102 → 102.1 → 102.1.1 |
| 9 | A | e6z9qA6 | A:199-278 | KH_5 | 327 → 327.11 → 327.11.1 |
| 10 | b | e6z9qb1 | b:48-128 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 11 | b | e6z9qb2 | b:129-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 12 | b | e6z9qb3 | b:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 13 | c | e6z9qc1 | c:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 14 | c | e6z9qc2 | c:48-128 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 15 | c | e6z9qc3 | c:129-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 16 | d | e6z9qd1 | d:48-128 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 17 | d | e6z9qd2 | d:129-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 18 | d | e6z9qd3 | d:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 19 | e | e6z9qe1 | e:48-128 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 20 | e | e6z9qe2 | e:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 21 | e | e6z9qe3 | e:129-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 22 | f | e6z9qf1 | f:48-128 | Rho_RNA_bind | 2 → 2.1 → 2.1.1 |
| 23 | f | e6z9qf2 | f:129-417 | ATP-synt_ab | 2004 → 2004.1 → 2004.1.1 |
| 24 | f | e6z9qf3 | f:1-47 | Rho_N | 130 → 130.1 → 130.1.1 |
| 25 | G | e6z9qG1 | G:6-117 | NusG | 304 → 304.17 → 304.17.1 |
| 26 | U | e6z9qU1 | U:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 27 | U | e6z9qU2 | U:4-52,U:174-238 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 28 | V | e6z9qV1 | V:5-52,V:179-236 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 29 | V | e6z9qV2 | V:237-325 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 30 | V | e6z9qV3 | V:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 31 | W | e6z9qW1 | W:2-80 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 32 | X | e6z9qX1 | X:226-234,X:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 33 | X | e6z9qX2 | X:2-151,X:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 34 | X | e6z9qX3 | X:939-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 35 | X | e6z9qX4 | X:828-938,X:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 36 | X | e6z9qX5 | X:152-225,X:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 37 | X | e6z9qX6 | X:791-827,X:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 38 | X | e6z9qX7 | X:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 39 | X | e6z9qX8 | X:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 40 | X | e6z9qX9 | X:578-712 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 41 | X | e6z9qX10 | X:1240-1341 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 42 | Y | e6z9qY1 | Y:895-931,Y:1214-1373 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 43 | Y | e6z9qY2 | Y:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 44 | Y | e6z9qY3 | Y:16-341 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 45 | Y | e6z9qY4 | Y:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 46 | Y | e6z9qY5 | Y:1133-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 47 | Y | e6z9qY6 | Y:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 48 | Y | e6z9qY7 | Y:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 49 | Y | e6z9qY8 | Y:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 50 | Y | e6z9qY9 | Y:1023-1132 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors