PDB 6ZFB
ELECTRON MICROSCOPY0 chains42 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
1 domainChain uview chain
2 domainsChain Uview chain
2 domainsChain vview chain
2 domainsChain Vview chain
2 domainsChain xview chain
7 domainsChain Xview chain
7 domainsChain yview chain
8 domainsAll Domains (42)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | d | e6zfbd1 | d:1-101 | HARE-HTH | 101 → 101.1 → 101.1.2 |
| 2 | D | e6zfbD01 | D:1-1009 | HARE-HTH | 101 → 101.1 → 101.1.2 |
| 3 | e | e6zfbe1 | e:1-69 | RpoY | 3115 → 3115.6 → 3115.6.1 |
| 4 | E | e6zfbE1 | E:1-69 | RpoY | 3115 → 3115.6 → 3115.6.1 |
| 5 | u | e6zfbu1 | u:6-49,u:172-236 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 6 | u | e6zfbu2 | u:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 7 | U | e6zfbU1 | U:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 8 | U | e6zfbU2 | U:6-49,U:172-236 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 9 | v | e6zfbv1 | v:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 10 | v | e6zfbv2 | v:4-49,v:172-230 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 11 | V | e6zfbV1 | V:4-49,V:172-230 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 12 | V | e6zfbV2 | V:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 13 | x | e6zfbx1 | x:671-749 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | x | e6zfbx2 | x:1043-1098,x:1124-1145 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | x | e6zfbx3 | x:141-295,x:317-322,x:342-372,x:398-407 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 16 | x | e6zfbx4 | x:534-670 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 17 | x | e6zfbx5 | x:788-919 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 18 | x | e6zfbx6 | x:750-787,x:920-1042 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 19 | x | e6zfbx7 | x:2-140,x:408-533 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 20 | X | e6zfbX1 | X:788-919 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 21 | X | e6zfbX2 | X:2-140,X:408-533 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 22 | X | e6zfbX3 | X:141-295,X:317-322,X:342-372,X:398-407 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 23 | X | e6zfbX4 | X:671-749 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 24 | X | e6zfbX5 | X:750-787,X:920-1042 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 25 | X | e6zfbX6 | X:534-670 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 26 | X | e6zfbX7 | X:1043-1098,X:1124-1145 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 27 | y | e6zfby1 | y:-3-335 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 28 | y | e6zfby2 | y:892-966,y:1030-1159 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 29 | y | e6zfby3 | y:328-365,y:404-487 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 30 | y | e6zfby4 | y:657-827 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 31 | y | e6zfby5 | y:488-656 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 32 | y | e6zfby6 | y:366-406 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 33 | y | e6zfby7 | y:828-891 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 34 | y | e6zfby8 | y:967-1029 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 35 | Y | e6zfbY1 | Y:6-335 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 36 | Y | e6zfbY2 | Y:892-966,Y:1030-1159 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 37 | Y | e6zfbY3 | Y:328-365,Y:404-487 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 38 | Y | e6zfbY4 | Y:657-827 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 39 | Y | e6zfbY5 | Y:488-656 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 40 | Y | e6zfbY6 | Y:366-406 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 41 | Y | e6zfbY7 | Y:828-891 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 42 | Y | e6zfbY8 | Y:967-1029 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors