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PDB 6ZQA

ELECTRON MICROSCOPY0 chains76 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (76)

#ChainDomain IDRangeFamilyClassification
1CAe6zqaCA1CA:80-326Fibrillarin2003 → 2003.1 → 2003.1.5
2CBe6zqaCB1CB:85-324Fibrillarin2003 → 2003.1 → 2003.1.5
3CDe6zqaCD1CD:3-167NOP5NT3407 → 3407.1 → 3407.1.1
4CDe6zqaCD2CD:168-298Nop606 → 606.1 → 606.1.1
5CDe6zqaCD3CD:288-329,CD:370-415Nop102 → 102.1 → 102.1.4
6CEe6zqaCE1CE:3-18,CE:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
7CEe6zqaCE2CE:285-403Nop102 → 102.1 → 102.1.4
8CEe6zqaCE3CE:155-284Nop606 → 606.1 → 606.1.1
9CFe6zqaCF1CF:4-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
10CGe6zqaCG1CG:3-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
11CHe6zqaCH1CH:115-570WD405 → 5.1 → 5.1.4
12CIe6zqaCI1CI:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
13CJe6zqaCJ1CJ:84-267Brix7502 → 7502.1 → 7502.1.1
14CLe6zqaCL1CL:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
15CLe6zqaCL2CL:929-1016RIBIOP_C1 → 1.1 → 1.1.7
16CLe6zqaCL3CL:818-928RIBIOP_C1 → 1.1 → 1.1.8
17CLe6zqaCL4CL:236-305,CL:614-636,CL:787-817AARP2CN1 → 1.1 → 1.1.7
18CMe6zqaCM1CM:183-287RTC_insert2485 → 2485.2 → 2485.2.1
19CMe6zqaCM2CM:7-182,CM:287-366RTC328 → 328.6 → 328.6.1
20CNe6zqaCN1CN:3-270RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
21DAe6zqaDA1DA:114-245Ribosomal_S3Ae230 → 230.6 → 230.6.1
22DAe6zqaDA2DA:2-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
23Dbe6zqaDb1Db:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
24Dce6zqaDc1Dc:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
25DFe6zqaDF1DF:13-225Ribosomal_S7167 → 167.1 → 167.1.1
26DHe6zqaDH1DH:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
27DHe6zqaDH2DH:4-105Ribosomal_S7e327 → 327.18 → 327.18.1
28DJe6zqaDJ1DJ:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
29DNe6zqaDN1DN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
30DNe6zqaDN2DN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
31DOe6zqaDO1DO:11-130Ribosomal_S112484 → 2484.1 → 2484.1.1
32DQe6zqaDQ1DQ:3-127Ribosomal_S9212 → 212.1 → 212.1.1
33DSe6zqaDS1DS:2-120Ribosomal_S13102 → 102.2 → 102.2.1
34DWe6zqaDW1DW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
35DWe6zqaDW2DW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
36DXe6zqaDX1DX:42-144Ribosom_S12_S232 → 2.1 → 2.1.1
37JFe6zqaJF1JF:29-251EMG12488 → 2488.1 → 2488.1.1
38JGe6zqaJG1JG:16-251EMG12488 → 2488.1 → 2488.1.1
39JHe6zqaJH1JH:205-466Bystin109 → 109.4 → 109.4.1
40JJe6zqaJJ1JJ:93-177KH_8327 → 327.11 → 327.11.2
41JJe6zqaJJ2JJ:178-274KH_PNO1_2nd327 → 327.11 → 327.11.2
42JOe6zqaJO1JO:38-119KH_8327 → 327.11 → 327.11.2
43JOe6zqaJO2JO:120-225KRR1-like_KH2327 → 327.11 → 327.11.2
44JPe6zqaJP1JP:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
45UAe6zqaUA1UA:735-856Utp12109 → 109.54 → 109.54.1
46UAe6zqaUA2UA:2-223,UA:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
47UAe6zqaUA3UA:343-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
48UDe6zqaUD1UD:375-689,UD:731-7765.1.4.05 → 5.1 → 5.1.4
49UDe6zqaUD2UD:29-374WD405 → 5.1 → 5.1.4
50UEe6zqaUE1UE:3-3725.1.5.05 → 5.1 → 5.1.5
51UEe6zqaUE2UE:434-557Utp12109 → 109.54 → 109.54.1
52UFe6zqaUF1UF:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
53UGe6zqaUG1UG:58-473WD40,BING4CT5 → 5.1 → 5.1.5
54UIe6zqaUI1UI:411-515109.54.1.0109 → 109.54 → 109.54.1
55UJe6zqaUJ1UJ:2-424,UJ:488-492U3snoRNP10109 → 109.4 → 109.4.1
56UJe6zqaUJ2UJ:488-808109.4.1.0109 → 109.4 → 109.4.1
57ULe6zqaUL1UL:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
58ULe6zqaUL2UL:745-921Utp12109 → 109.54 → 109.54.1
59ULe6zqaUL3UL:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
60UMe6zqaUM1UM:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
61UMe6zqaUM2UM:7-331WD405 → 5.1 → 5.1.4
62UMe6zqaUM3UM:650-817Utp13109 → 109.54 → 109.54.1
63UOe6zqaUO1UO:2-364WD405 → 5.1 → 5.1.5
64UOe6zqaUO2UO:388-512UTP15_C109 → 109.54 → 109.54.1
65URe6zqaUR1UR:235-591WD405 → 5.1 → 5.1.4
66UUe6zqaUU1UU:350-684WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
67UUe6zqaUU2UU:20-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
68UVe6zqaUV1UV:81-356Nrap316 → 316.1 → 316.1.1
69UVe6zqaUV2UV:1092-1237Nrap_D6304 → 304.20 → 304.20.1
70UVe6zqaUV3UV:699-905Nrap_D4316 → 316.1 → 316.1.1
71UVe6zqaUV4UV:357-514Nrap_D2102 → 102.1 → 102.1.3
72UVe6zqaUV5UV:906-983,UV:1010-1091Nrap_D5102 → 102.1 → 102.1.3
73UVe6zqaUV6UV:515-698Nrap_D3304 → 304.20 → 304.20.1
74UXe6zqaUX1UX:57-182Fcf12006 → 2006.1 → 2006.1.4
75UZe6zqaUZ1UZ:64-178Ribosomal_L12007 → 2007.25 → 2007.25.1
76UZe6zqaUZ2UZ:11-63,UZ:179-257Ribosomal_L1898 → 898.1 → 898.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors