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PDB 6ZQB

ELECTRON MICROSCOPY0 chains91 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (91)

#ChainDomain IDRangeFamilyClassification
1CAe6zqbCA1CA:80-326Fibrillarin2003 → 2003.1 → 2003.1.5
2CBe6zqbCB1CB:85-324Fibrillarin2003 → 2003.1 → 2003.1.5
3CDe6zqbCD1CD:3-167NOP5NT3407 → 3407.1 → 3407.1.1
4CDe6zqbCD2CD:168-298Nop606 → 606.1 → 606.1.1
5CDe6zqbCD3CD:288-329,CD:370-415Nop102 → 102.1 → 102.1.4
6CEe6zqbCE1CE:3-18,CE:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
7CEe6zqbCE2CE:285-403Nop102 → 102.1 → 102.1.4
8CEe6zqbCE3CE:155-284Nop606 → 606.1 → 606.1.1
9CFe6zqbCF1CF:4-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
10CGe6zqbCG1CG:3-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
11CHe6zqbCH1CH:60-78,CH:110-570WD405 → 5.1 → 5.1.4
12CIe6zqbCI1CI:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
13CJe6zqbCJ1CJ:84-267Brix7502 → 7502.1 → 7502.1.1
14CLe6zqbCL1CL:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
15CLe6zqbCL2CL:929-1016RIBIOP_C1 → 1.1 → 1.1.7
16CLe6zqbCL3CL:818-928RIBIOP_C1 → 1.1 → 1.1.8
17CLe6zqbCL4CL:236-305,CL:614-636,CL:787-817AARP2CN1 → 1.1 → 1.1.7
18CMe6zqbCM1CM:183-287RTC_insert2485 → 2485.2 → 2485.2.1
19CMe6zqbCM2CM:7-182,CM:287-366RTC328 → 328.6 → 328.6.1
20CNe6zqbCN1CN:3-270RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
21DAe6zqbDA1DA:114-245Ribosomal_S3Ae230 → 230.6 → 230.6.1
22DAe6zqbDA2DA:2-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
23Dbe6zqbDb1Db:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
24Dce6zqbDc1Dc:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
25DEe6zqbDE1DE:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
26DEe6zqbDE2DE:176-246KOW,40S_S4_C4 → 4.1 → 4.1.1
27DEe6zqbDE3DE:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
28DFe6zqbDF1DF:13-225Ribosomal_S7167 → 167.1 → 167.1.1
29DGe6zqbDG1DG:1-218Ribosomal_S6e239 → 239.1 → 239.1.1
30DHe6zqbDH1DH:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
31DHe6zqbDH2DH:4-105Ribosomal_S7e327 → 327.18 → 327.18.1
32DIe6zqbDI1DI:2-123,DI:146-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
33DJe6zqbDJ1DJ:10-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
34DLe6zqbDL1DL:6-145Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
35DNe6zqbDN1DN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
36DNe6zqbDN2DN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
37DOe6zqbDO1DO:11-130Ribosomal_S112484 → 2484.1 → 2484.1.1
38DQe6zqbDQ1DQ:3-127Ribosomal_S9212 → 212.1 → 212.1.1
39DSe6zqbDS1DS:2-119Ribosomal_S13102 → 102.2 → 102.2.1
40DWe6zqbDW1DW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
41DWe6zqbDW2DW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
42DXe6zqbDX1DX:42-144Ribosom_S12_S232 → 2.1 → 2.1.1
43DYe6zqbDY1DY:2-98Ribosomal_S24e304 → 304.109 → 304.109.1
44JAe6zqbJA1JA:498-663,JA:704-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
45JAe6zqbJA2JA:211-326,JA:350-431,JA:465-497Helicase_RecD2004 → 2004.1 → 2004.1.1
46JAe6zqbJA3JA:2-210TmcA_N2004 → 2004.1 → 2004.1.1
47JAe6zqbJA4JA:835-924tRNA_bind_2101 → 101.1 → 101.1.1
48JBe6zqbJB1JB:498-663,JB:704-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
49JBe6zqbJB2JB:211-431,JB:465-497Helicase_RecD2004 → 2004.1 → 2004.1.1
50JBe6zqbJB3JB:2-210TmcA_N2004 → 2004.1 → 2004.1.1
51JBe6zqbJB4JB:835-924tRNA_bind_2101 → 101.1 → 101.1.1
52JCe6zqbJC1JC:4-366Beta-prop_NOL10_N5 → 5.1 → 5.1.5
53JFe6zqbJF1JF:29-251EMG12488 → 2488.1 → 2488.1.1
54JGe6zqbJG1JG:16-251EMG12488 → 2488.1 → 2488.1.1
55JHe6zqbJH1JH:205-466Bystin109 → 109.4 → 109.4.1
56JJe6zqbJJ1JJ:93-177KH_8327 → 327.11 → 327.11.2
57JJe6zqbJJ2JJ:178-274KH_PNO1_2nd327 → 327.11 → 327.11.2
58JOe6zqbJO1JO:120-212KRR1-like_KH2327 → 327.11 → 327.11.2
59JOe6zqbJO2JO:38-119KH_8327 → 327.11 → 327.11.2
60JPe6zqbJP1JP:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
61UAe6zqbUA1UA:735-856Utp12109 → 109.54 → 109.54.1
62UAe6zqbUA2UA:2-223,UA:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
63UAe6zqbUA3UA:343-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
64UDe6zqbUD1UD:29-374WD405 → 5.1 → 5.1.4
65UDe6zqbUD2UD:375-689,UD:731-7765.1.4.05 → 5.1 → 5.1.4
66UEe6zqbUE1UE:434-557Utp12109 → 109.54 → 109.54.1
67UEe6zqbUE2UE:3-3725.1.5.05 → 5.1 → 5.1.5
68UFe6zqbUF1UF:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
69UGe6zqbUG1UG:58-473WD40,BING4CT5 → 5.1 → 5.1.5
70UIe6zqbUI1UI:411-515109.54.1.0109 → 109.54 → 109.54.1
71UJe6zqbUJ1UJ:3-421U3snoRNP10109 → 109.4 → 109.4.1
72ULe6zqbUL1UL:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
73ULe6zqbUL2UL:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
74ULe6zqbUL3UL:745-921Utp12109 → 109.54 → 109.54.1
75UMe6zqbUM1UM:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
76UMe6zqbUM2UM:7-331WD405 → 5.1 → 5.1.4
77UMe6zqbUM3UM:650-817Utp13109 → 109.54 → 109.54.1
78UOe6zqbUO1UO:2-364WD405 → 5.1 → 5.1.5
79UOe6zqbUO2UO:388-512UTP15_C109 → 109.54 → 109.54.1
80URe6zqbUR1UR:235-591WD405 → 5.1 → 5.1.4
81UUe6zqbUU1UU:350-684WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
82UUe6zqbUU2UU:20-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
83UVe6zqbUV1UV:906-983,UV:1010-1091Nrap_D5102 → 102.1 → 102.1.3
84UVe6zqbUV2UV:99-356Nrap316 → 316.1 → 316.1.1
85UVe6zqbUV3UV:357-514Nrap_D2102 → 102.1 → 102.1.3
86UVe6zqbUV4UV:515-698Nrap_D3304 → 304.20 → 304.20.1
87UVe6zqbUV5UV:1092-1237Nrap_D6304 → 304.20 → 304.20.1
88UVe6zqbUV6UV:699-905Nrap_D4316 → 316.1 → 316.1.1
89UXe6zqbUX1UX:57-182Fcf12006 → 2006.1 → 2006.1.4
90UZe6zqbUZ1UZ:11-63,UZ:179-257Ribosomal_L1898 → 898.1 → 898.1.1
91UZe6zqbUZ2UZ:64-178Ribosomal_L12007 → 2007.25 → 2007.25.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors