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PDB 6ZQC

ELECTRON MICROSCOPY0 chains92 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (92)

#ChainDomain IDRangeFamilyClassification
1CAe6zqcCA1CA:80-326Fibrillarin2003 → 2003.1 → 2003.1.5
2CBe6zqcCB1CB:85-324Fibrillarin2003 → 2003.1 → 2003.1.5
3CDe6zqcCD1CD:288-329,CD:370-415Nop102 → 102.1 → 102.1.4
4CDe6zqcCD2CD:168-298Nop606 → 606.1 → 606.1.1
5CDe6zqcCD3CD:3-167NOP5NT3407 → 3407.1 → 3407.1.1
6CEe6zqcCE1CE:3-18,CE:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
7CEe6zqcCE2CE:285-403Nop102 → 102.1 → 102.1.4
8CEe6zqcCE3CE:155-284Nop606 → 606.1 → 606.1.1
9CFe6zqcCF1CF:4-126Ribosomal_L7Ae301 → 301.1 → 301.1.1
10CGe6zqcCG1CG:3-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
11CHe6zqcCH1CH:115-570WD405 → 5.1 → 5.1.4
12CIe6zqcCI1CI:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
13CJe6zqcCJ1CJ:84-267Brix7502 → 7502.1 → 7502.1.1
14CLe6zqcCL1CL:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
15CLe6zqcCL2CL:929-1016RIBIOP_C1 → 1.1 → 1.1.7
16CLe6zqcCL3CL:818-928RIBIOP_C1 → 1.1 → 1.1.8
17CLe6zqcCL4CL:236-305,CL:614-636,CL:787-817AARP2CN1 → 1.1 → 1.1.7
18CMe6zqcCM1CM:183-287RTC_insert2485 → 2485.2 → 2485.2.1
19CMe6zqcCM2CM:7-182,CM:287-366RTC328 → 328.6 → 328.6.1
20CNe6zqcCN1CN:3-270RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
21DAe6zqcDA1DA:2-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
22DAe6zqcDA2DA:114-245Ribosomal_S3Ae230 → 230.6 → 230.6.1
23Dbe6zqcDb1Db:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
24Dce6zqcDc1Dc:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
25DEe6zqcDE1DE:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
26DEe6zqcDE2DE:176-246KOW,40S_S4_C4 → 4.1 → 4.1.1
27DEe6zqcDE3DE:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
28DFe6zqcDF1DF:13-225Ribosomal_S7167 → 167.1 → 167.1.1
29DGe6zqcDG1DG:1-218Ribosomal_S6e239 → 239.1 → 239.1.1
30DHe6zqcDH1DH:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
31DHe6zqcDH2DH:4-105Ribosomal_S7e327 → 327.18 → 327.18.1
32DIe6zqcDI1DI:2-123,DI:146-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
33DJe6zqcDJ1DJ:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
34DLe6zqcDL1DL:6-145Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
35DNe6zqcDN1DN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
36DNe6zqcDN2DN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
37DOe6zqcDO1DO:11-130Ribosomal_S112484 → 2484.1 → 2484.1.1
38DQe6zqcDQ1DQ:3-127Ribosomal_S9212 → 212.1 → 212.1.1
39DSe6zqcDS1DS:2-119Ribosomal_S13102 → 102.2 → 102.2.1
40DWe6zqcDW1DW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
41DWe6zqcDW2DW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
42DXe6zqcDX1DX:42-144Ribosom_S12_S232 → 2.1 → 2.1.1
43DYe6zqcDY1DY:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
44JAe6zqcJA1JA:498-663,JA:704-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
45JAe6zqcJA2JA:211-326,JA:350-431,JA:465-497Helicase_RecD2004 → 2004.1 → 2004.1.1
46JAe6zqcJA3JA:2-210TmcA_N2004 → 2004.1 → 2004.1.1
47JAe6zqcJA4JA:835-924tRNA_bind_2101 → 101.1 → 101.1.1
48JBe6zqcJB1JB:498-663,JB:704-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
49JBe6zqcJB2JB:211-431,JB:465-497Helicase_RecD2004 → 2004.1 → 2004.1.1
50JBe6zqcJB3JB:2-210TmcA_N2004 → 2004.1 → 2004.1.1
51JBe6zqcJB4JB:835-924tRNA_bind_2101 → 101.1 → 101.1.1
52JCe6zqcJC1JC:4-366Beta-prop_NOL10_N5 → 5.1 → 5.1.5
53JFe6zqcJF1JF:29-251EMG12488 → 2488.1 → 2488.1.1
54JGe6zqcJG1JG:16-251EMG12488 → 2488.1 → 2488.1.1
55JHe6zqcJH1JH:205-466Bystin109 → 109.4 → 109.4.1
56JIe6zqcJI1JI:1457-1721HAT_PRP39_N109 → 109.4 → 109.4.1
57JJe6zqcJJ1JJ:93-177KH_8327 → 327.11 → 327.11.2
58JJe6zqcJJ2JJ:178-274KH_PNO1_2nd327 → 327.11 → 327.11.2
59JOe6zqcJO1JO:120-212KRR1-like_KH2327 → 327.11 → 327.11.2
60JOe6zqcJO2JO:38-119KH_8327 → 327.11 → 327.11.2
61JPe6zqcJP1JP:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
62UAe6zqcUA1UA:735-856Utp12109 → 109.54 → 109.54.1
63UAe6zqcUA2UA:343-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
64UAe6zqcUA3UA:2-223,UA:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
65UDe6zqcUD1UD:29-374WD405 → 5.1 → 5.1.4
66UDe6zqcUD2UD:375-689,UD:731-7765.1.4.05 → 5.1 → 5.1.4
67UEe6zqcUE1UE:434-557Utp12109 → 109.54 → 109.54.1
68UEe6zqcUE2UE:3-3725.1.5.05 → 5.1 → 5.1.5
69UFe6zqcUF1UF:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
70UGe6zqcUG1UG:58-473WD40,BING4CT5 → 5.1 → 5.1.5
71UIe6zqcUI1UI:411-515109.54.1.0109 → 109.54 → 109.54.1
72UJe6zqcUJ1UJ:3-421U3snoRNP10109 → 109.4 → 109.4.1
73ULe6zqcUL1UL:745-921Utp12109 → 109.54 → 109.54.1
74ULe6zqcUL2UL:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
75ULe6zqcUL3UL:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
76UMe6zqcUM1UM:332-649WD40, Beta-prop_WDR75_2nd5 → 5.1 → 5.1.4
77UMe6zqcUM2UM:7-331WD405 → 5.1 → 5.1.4
78UMe6zqcUM3UM:650-817Utp13109 → 109.54 → 109.54.1
79UOe6zqcUO1UO:34-364WD405 → 5.1 → 5.1.5
80UOe6zqcUO2UO:2-33,UO:388-512UTP15_C109 → 109.54 → 109.54.1
81URe6zqcUR1UR:235-591WD405 → 5.1 → 5.1.4
82UUe6zqcUU1UU:350-684WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
83UUe6zqcUU2UU:20-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
84UVe6zqcUV1UV:699-905Nrap_D4316 → 316.1 → 316.1.1
85UVe6zqcUV2UV:515-698Nrap_D3304 → 304.20 → 304.20.1
86UVe6zqcUV3UV:1092-1237Nrap_D6304 → 304.20 → 304.20.1
87UVe6zqcUV4UV:98-356Nrap316 → 316.1 → 316.1.1
88UVe6zqcUV5UV:357-514Nrap_D2102 → 102.1 → 102.1.3
89UVe6zqcUV6UV:906-983,UV:1010-1091Nrap_D5102 → 102.1 → 102.1.3
90UXe6zqcUX1UX:57-182Fcf12006 → 2006.1 → 2006.1.4
91UZe6zqcUZ1UZ:64-178Ribosomal_L12007 → 2007.25 → 2007.25.1
92UZe6zqcUZ2UZ:11-63,UZ:179-257Ribosomal_L1898 → 898.1 → 898.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors