PDB 6ZQE
ELECTRON MICROSCOPY0 chains84 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain CAview chain
1 domainChain CBview chain
1 domainChain CFview chain
1 domainChain CGview chain
1 domainChain CHview chain
1 domainChain CIview chain
1 domainChain CJview chain
1 domainChain CLview chain
4 domainsChain CMview chain
2 domainsChain CNview chain
1 domainChain DAview chain
2 domainsChain Dbview chain
1 domainChain Dcview chain
1 domainChain DEview chain
3 domainsChain DFview chain
1 domainChain DGview chain
1 domainChain DHview chain
2 domainsChain DIview chain
1 domainChain DJview chain
1 domainChain DLview chain
1 domainChain DNview chain
2 domainsChain DOview chain
1 domainChain DQview chain
1 domainChain DSview chain
1 domainChain DTview chain
1 domainChain DWview chain
2 domainsChain DXview chain
1 domainChain DYview chain
1 domainChain JDview chain
6 domainsChain JFview chain
1 domainChain JGview chain
1 domainChain JHview chain
1 domainChain JJview chain
2 domainsChain JLview chain
2 domainsChain UAview chain
3 domainsChain UDview chain
2 domainsChain UEview chain
1 domainChain UIview chain
2 domainsChain UJview chain
1 domainChain ULview chain
3 domainsChain UMview chain
3 domainsChain UOview chain
2 domainsChain URview chain
1 domainChain UUview chain
2 domainsChain UVview chain
6 domainsChain UXview chain
1 domainAll Domains (84)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | CA | e6zqeCA1 | CA:80-326 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 2 | CB | e6zqeCB1 | CB:85-324 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 3 | CD | e6zqeCD1 | CD:3-167 | NOP5NT | 3407 → 3407.1 → 3407.1.1 |
| 4 | CD | e6zqeCD2 | CD:168-298 | Nop | 606 → 606.1 → 606.1.1 |
| 5 | CD | e6zqeCD3 | CD:288-329,CD:370-415 | Nop | 102 → 102.1 → 102.1.4 |
| 6 | CE | e6zqeCE1 | CE:3-18,CE:38-154 | NOP5NT, Nop5_56-rel_N_Arc | 3407 → 3407.1 → 3407.1.1 |
| 7 | CE | e6zqeCE2 | CE:285-403 | Nop | 102 → 102.1 → 102.1.4 |
| 8 | CE | e6zqeCE3 | CE:155-284 | Nop | 606 → 606.1 → 606.1.1 |
| 9 | CF | e6zqeCF1 | CF:5-125 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 10 | CG | e6zqeCG1 | CG:5-125 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 11 | CH | e6zqeCH1 | CH:115-572 | WD40 | 5 → 5.1 → 5.1.4 |
| 12 | CI | e6zqeCI1 | CI:2-183 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 13 | CJ | e6zqeCJ1 | CJ:84-267 | Brix | 7502 → 7502.1 → 7502.1.1 |
| 14 | CL | e6zqeCL1 | CL:54-235 | AAA, GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 15 | CL | e6zqeCL2 | CL:929-1016 | RIBIOP_C | 1 → 1.1 → 1.1.7 |
| 16 | CL | e6zqeCL3 | CL:818-928 | RIBIOP_C | 1 → 1.1 → 1.1.8 |
| 17 | CL | e6zqeCL4 | CL:236-305,CL:614-636,CL:787-817 | AARP2CN | 1 → 1.1 → 1.1.7 |
| 18 | CM | e6zqeCM1 | CM:7-182,CM:287-366 | RTC | 328 → 328.6 → 328.6.1 |
| 19 | CM | e6zqeCM2 | CM:183-287 | RTC_insert | 2485 → 2485.2 → 2485.2.1 |
| 20 | CN | e6zqeCN1 | CN:3-231 | RRP7,RRM_Rrp7 | 304 → 304.9 → 304.9.1 |
| 21 | DA | e6zqeDA1 | DA:2-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 22 | DA | e6zqeDA2 | DA:114-245 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 23 | Db | e6zqeDb1 | Db:2-82 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 24 | Dc | e6zqeDc1 | Dc:5-67 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 25 | DE | e6zqeDE1 | DE:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 26 | DE | e6zqeDE2 | DE:2-116 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 27 | DE | e6zqeDE3 | DE:176-247 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 28 | DF | e6zqeDF1 | DF:13-225 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 29 | DG | e6zqeDG1 | DG:1-218 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 30 | DH | e6zqeDH1 | DH:106-187 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 31 | DH | e6zqeDH2 | DH:4-105 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 32 | DI | e6zqeDI1 | DI:2-123,DI:146-200 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 33 | DJ | e6zqeDJ1 | DJ:2-186 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 34 | DL | e6zqeDL1 | DL:6-145 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 35 | DN | e6zqeDN1 | DN:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 36 | DN | e6zqeDN2 | DN:83-151 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 37 | DO | e6zqeDO1 | DO:11-137 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 38 | DQ | e6zqeDQ1 | DQ:3-127 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 39 | DS | e6zqeDS1 | DS:2-120 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 40 | DT | e6zqeDT1 | DT:2-144 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 41 | DW | e6zqeDW1 | DW:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 42 | DW | e6zqeDW2 | DW:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 43 | DX | e6zqeDX1 | DX:2-144 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 44 | DY | e6zqeDY1 | DY:2-135 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 45 | JD | e6zqeJD1 | JD:377-586 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 46 | JD | e6zqeJD2 | JD:587-646,JD:710-840 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 47 | JD | e6zqeJD3 | JD:841-906 | HA2_N | 101 → 101.1 → 101.1.2 |
| 48 | JD | e6zqeJD4 | JD:907-947,JD:977-1073 | HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 49 | JD | e6zqeJD5 | JD:1074-1187 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 50 | JD | e6zqeJD6 | JD:1188-1263 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 51 | JF | e6zqeJF1 | JF:29-251 | EMG1 | 2488 → 2488.1 → 2488.1.1 |
| 52 | JG | e6zqeJG1 | JG:16-251 | EMG1 | 2488 → 2488.1 → 2488.1.1 |
| 53 | JH | e6zqeJH1 | JH:205-466 | Bystin | 109 → 109.4 → 109.4.1 |
| 54 | JJ | e6zqeJJ1 | JJ:178-273 | KH_PNO1_2nd | 327 → 327.11 → 327.11.2 |
| 55 | JJ | e6zqeJJ2 | JJ:90-177 | KH_8 | 327 → 327.11 → 327.11.2 |
| 56 | JL | e6zqeJL1 | JL:217-318 | RrnaAD | 102 → 102.2 → 102.2.1 |
| 57 | JL | e6zqeJL2 | JL:36-216 | RrnaAD, Methyltransf_25 | 2003 → 2003.1 → 2003.1.5 |
| 58 | UA | e6zqeUA1 | UA:735-856 | Utp12 | 109 → 109.54 → 109.54.1 |
| 59 | UA | e6zqeUA2 | UA:2-223,UA:245-343 | WD40,ANAPC4_WD40 | 5 → 5.1 → 5.1.4 |
| 60 | UA | e6zqeUA3 | UA:343-632,UA:675-734 | WD40,ANAPC4_WD40 | 5 → 5.1 → 5.1.4 |
| 61 | UD | e6zqeUD1 | UD:375-666,UD:731-776 | 5.1.4.0 | 5 → 5.1 → 5.1.4 |
| 62 | UD | e6zqeUD2 | UD:29-374 | WD40 | 5 → 5.1 → 5.1.4 |
| 63 | UE | e6zqeUE1 | UE:428-515 | 109.54.1.0 | 109 → 109.54 → 109.54.1 |
| 64 | UI | e6zqeUI1 | UI:3-372 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 65 | UI | e6zqeUI2 | UI:434-557 | Utp12 | 109 → 109.54 → 109.54.1 |
| 66 | UJ | e6zqeUJ1 | UJ:3-421 | U3snoRNP10 | 109 → 109.4 → 109.4.1 |
| 67 | UL | e6zqeUL1 | UL:41-275,UL:321-386 | WD40, Beta-prop_WDR3_1st | 5 → 5.1 → 5.1.4 |
| 68 | UL | e6zqeUL2 | UL:745-773,UL:793-918 | Utp12 | 109 → 109.54 → 109.54.1 |
| 69 | UL | e6zqeUL3 | UL:5-40,UL:386-687 | WD40, Beta-prop_WDR3_2nd | 5 → 5.1 → 5.1.4 |
| 70 | UM | e6zqeUM1 | UM:332-649 | WD40, Beta-prop_WDR75_2nd | 5 → 5.1 → 5.1.4 |
| 71 | UM | e6zqeUM2 | UM:7-331 | WD40 | 5 → 5.1 → 5.1.4 |
| 72 | UM | e6zqeUM3 | UM:650-817 | Utp13 | 109 → 109.54 → 109.54.1 |
| 73 | UO | e6zqeUO1 | UO:2-364 | WD40 | 5 → 5.1 → 5.1.5 |
| 74 | UO | e6zqeUO2 | UO:388-512 | UTP15_C | 109 → 109.54 → 109.54.1 |
| 75 | UR | e6zqeUR1 | UR:235-591 | WD40 | 5 → 5.1 → 5.1.4 |
| 76 | UU | e6zqeUU1 | UU:350-684 | WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd | 5 → 5.1 → 5.1.4 |
| 77 | UU | e6zqeUU2 | UU:20-349 | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | 5 → 5.1 → 5.1.4 |
| 78 | UV | e6zqeUV1 | UV:357-514 | Nrap_D2 | 102 → 102.1 → 102.1.3 |
| 79 | UV | e6zqeUV2 | UV:699-905 | Nrap_D4 | 316 → 316.1 → 316.1.1 |
| 80 | UV | e6zqeUV3 | UV:906-983,UV:1010-1091 | Nrap_D5 | 102 → 102.1 → 102.1.3 |
| 81 | UV | e6zqeUV4 | UV:515-698 | Nrap_D3 | 304 → 304.20 → 304.20.1 |
| 82 | UV | e6zqeUV5 | UV:81-356 | Nrap | 316 → 316.1 → 316.1.1 |
| 83 | UV | e6zqeUV6 | UV:1092-1237 | Nrap_D6 | 304 → 304.20 → 304.20.1 |
| 84 | UX | e6zqeUX1 | UX:4-21,UX:41-189 | Fcf1 | 2006 → 2006.1 → 2006.1.4 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors