PDB 7ABG
ELECTRON MICROSCOPY0 chains85 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainChain 4view chain
1 domainChain 9view chain
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6 domainsChain A1view chain
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9 domainsChain A6view chain
1 domainChain bview chain
1 domainChain Bview chain
2 domainsChain cview chain
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4 domainsChain fview chain
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1 domainChain lview chain
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2 domainsChain mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain pview chain
1 domainChain Pview chain
2 domainsChain qview chain
1 domainChain Qview chain
1 domainChain rview chain
5 domainsChain sview chain
12 domainsChain uview chain
1 domainChain Vview chain
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1 domainChain Yview chain
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1 domainAll Domains (85)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e7abg01 | 0:243-370 | FHA | 73 → 73.1 → 73.1.1 |
| 2 | 4 | e7abg41 | 4:2-353 | 130.1.1.0 | 130 → 130.1 → 130.1.1 |
| 3 | 9 | e7abg91 | 9:16-98 | LSM | 4 → 4.1 → 4.1.1 |
| 4 | a | e7abga1 | a:26-114 | LSM | 4 → 4.1 → 4.1.1 |
| 5 | A | e7abgA1 | A:1755-2011,A:2064-2066 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 6 | A | e7abgA2 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 7 | A | e7abgA3 | A:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 8 | A | e7abgA4 | A:1528-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 9 | A | e7abgA5 | A:63-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 10 | A | e7abgA6 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 11 | A1 | e7abgA11 | A1:6-153 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 12 | A2 | e7abgA21 | A2:11-89 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | A3 | e7abgA31 | A3:4-73 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | A4 | e7abgA401 | A4:134-162 | WW | 64 → 64.1 → 64.1.1 |
| 15 | A4 | e7abgA402 | A4:428-464 | WW | 64 → 64.1 → 64.1.1 |
| 16 | A4 | e7abgA403 | A4:517-579 | WW_TCERG1 | 64 → 64.1 → 64.1.1 |
| 17 | A4 | e7abgA404 | A4:661-717 | FF | 101 → 101.1 → 101.1.17 |
| 18 | A4 | e7abgA405 | A4:718-783 | FF | 101 → 101.1 → 101.1.17 |
| 19 | A4 | e7abgA406 | A4:784-845 | FF | 101 → 101.1 → 101.1.17 |
| 20 | A4 | e7abgA407 | A4:895-953 | FF | 101 → 101.1 → 101.1.17 |
| 21 | A4 | e7abgA408 | A4:954-1011 | FF | 101 → 101.1 → 101.1.17 |
| 22 | A4 | e7abgA409 | A4:1012-1080 | FF | 101 → 101.1 → 101.1.17 |
| 23 | A5 | e7abgA51 | A5:480-665,A5:687-790 | MIF4G_like_2 | 109 → 109.4 → 109.4.1 |
| 24 | A5 | e7abgA52 | A5:290-479 | MIF4G_like | 109 → 109.4 → 109.4.1 |
| 25 | A5 | e7abgA53 | A5:26-290 | MIF4G | 109 → 109.4 → 109.4.1 |
| 26 | A6 | e7abgA61 | A6:122-195 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 27 | b | e7abgb1 | b:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | B | e7abgB1 | B:85-94,B:149-225 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 29 | B | e7abgB2 | B:3-84 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 30 | c | e7abgc1 | c:15-92 | LSM | 4 → 4.1 → 4.1.1 |
| 31 | C | e7abgC1 | C:1-80 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | d | e7abgd1 | d:4-72 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | D | e7abgD1 | D:56-357 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 34 | e | e7abge1 | e:4-81 | LSM | 4 → 4.1 → 4.1.1 |
| 35 | E | e7abgE1 | E:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 36 | E | e7abgE2 | E:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 37 | E | e7abgE3 | E:404-441,E:773-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 38 | E | e7abgE4 | E:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 39 | f | e7abgf1 | f:7-86 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | F | e7abgF1 | F:45-93 | zf-met | 386 → 386.1 → 386.1.1 |
| 41 | g | e7abgg1 | g:2-95 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | G | e7abgG1 | G:181-500 | WD40 | 5 → 5.1 → 5.1.4 |
| 43 | h | e7abgh1 | h:13-115 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | H | e7abgH1 | H:10-85 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | i | e7abgi1 | i:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | I | e7abgI1 | I:1-176 | PRP38 | 109 → 109.50 → 109.50.1 |
| 47 | j | e7abgj1 | j:11-91 | LSM | 4 → 4.1 → 4.1.1 |
| 48 | J | e7abgJ1 | J:8-76 | LSM | 4 → 4.1 → 4.1.1 |
| 49 | k | e7abgk1 | k:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 50 | l | e7abgl1 | l:2-84 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | L | e7abgL1 | L:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 52 | L | e7abgL2 | L:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 53 | m | e7abgm1 | m:6-87 | LSM | 4 → 4.1 → 4.1.1 |
| 54 | n | e7abgn1 | n:1-80 | LSM | 4 → 4.1 → 4.1.1 |
| 55 | N | e7abgN1 | N:79-134 | zf-C2H2_jaz | 386 → 386.1 → 386.1.1 |
| 56 | p | e7abgp1 | p:160-219 | Surp | 574 → 574.1 → 574.1.1 |
| 57 | P | e7abgP1 | P:90-100,P:145-220 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 58 | P | e7abgP2 | P:15-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 59 | q | e7abgq1 | q:1-73 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 60 | Q | e7abgQ1 | Q:3-140 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 61 | r | e7abgr1 | r:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 62 | r | e7abgr2 | r:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 63 | r | e7abgr3 | r:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 64 | r | e7abgr4 | r:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 65 | r | e7abgr5 | r:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 66 | s | e7abgs1 | s:1722-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 67 | s | e7abgs2 | s:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 68 | s | e7abgs3 | s:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 69 | s | e7abgs4 | s:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 70 | s | e7abgs5 | s:683-887 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 71 | s | e7abgs6 | s:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 72 | s | e7abgs7 | s:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 73 | s | e7abgs8 | s:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 74 | s | e7abgs9 | s:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 75 | s | e7abgs10 | s:404-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 76 | s | e7abgs11 | s:888-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 77 | s | e7abgs12 | s:1521-1721 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 78 | u | e7abgu1 | u:465-1304 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 79 | V | e7abgV1 | V:1-90 | LSM | 4 → 4.1 → 4.1.1 |
| 80 | w | e7abgw1 | w:12-89 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 81 | W | e7abgW1 | W:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 82 | x | e7abgx1 | x:1-79 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 83 | y | e7abgy1 | y:2-101 | PHF5 | 377 → 377.1 → 377.1.4 |
| 84 | Y | e7abgY1 | Y:32-126 | PWI | 592 → 592.1 → 592.1.1 |
| 85 | z | e7abgz1 | z:12-119 | RRM_1 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors