PDB 7CKQ
ELECTRON MICROSCOPY0 chains28 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
8 domainsChain Eview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsAll Domains (28)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e7ckqA1 | A:5-49,A:172-228 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e7ckqA2 | A:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e7ckqB1 | B:6-49,B:172-225 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e7ckqB2 | B:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e7ckqC1 | C:141-288,C:368-407 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 6 | C | e7ckqC2 | C:1043-1145 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 7 | C | e7ckqC3 | C:671-749 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 8 | C | e7ckqC4 | C:750-787,C:920-1042 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 9 | C | e7ckqC5 | C:534-670 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 10 | C | e7ckqC6 | C:6-140,C:408-533 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | C | e7ckqC7 | C:788-919 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | D | e7ckqD1 | D:893-966,D:1030-1185 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 13 | D | e7ckqD2 | D:7-335 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 14 | D | e7ckqD3 | D:328-365,D:404-487 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | D | e7ckqD4 | D:657-827 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 16 | D | e7ckqD5 | D:488-656 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 17 | D | e7ckqD6 | D:366-406 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 18 | D | e7ckqD7 | D:828-892 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 19 | D | e7ckqD8 | D:967-1029 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 20 | E | e7ckqE1 | E:2-63 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 21 | F | e7ckqF1 | F:207-263 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 22 | F | e7ckqF2 | F:100-206 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 23 | F | e7ckqF3 | F:235-237,F:264-371 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 24 | G | e7ckqG1 | G:2-120 | MerR_1 | 101 → 101.1 → 101.1.9 |
| 25 | G | e7ckqG2 | G:121-277 | GyrI-like | 886 → 886.1 → 886.1.1 |
| 26 | H | e7ckqH1 | H:1-60 | RpoY | 3115 → 3115.6 → 3115.6.1 |
| 27 | I | e7ckqI1 | I:121-277 | GyrI-like | 886 → 886.1 → 886.1.1 |
| 28 | I | e7ckqI2 | I:2-120 | MerR_1 | 101 → 101.1 → 101.1.9 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors