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PDB 7D63

ELECTRON MICROSCOPY0 chains96 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (96)

#ChainDomain IDRangeFamilyClassification
13Be7d633B13B:82-326Fibrillarin2003 → 2003.1 → 2003.1.5
23Ce7d633C13C:86-322Fibrillarin2003 → 2003.1 → 2003.1.5
33De7d633D13D:166-300Nop606 → 606.1 → 606.1.1
43De7d633D23D:301-336,3D:370-415Nop102 → 102.1 → 102.1.4
53De7d633D33D:3-165NOP5NT3407 → 3407.1 → 3407.1.1
63Ee7d633E13E:3-18,3E:38-154NOP5NT, Nop5_56-rel_N_Arc3407 → 3407.1 → 3407.1.1
73Ee7d633E23E:285-403Nop102 → 102.1 → 102.1.4
83Ee7d633E33E:155-284Nop606 → 606.1 → 606.1.1
93Fe7d633F13F:58-77,3F:102-570WD405 → 5.1 → 5.1.5
103Ge7d633G13G:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
113He7d633H13H:5-125Ribosomal_L7Ae301 → 301.1 → 301.1.1
125Ce7d635C15C:36-466,5C:544-553WD40,BING4CT5 → 5.1 → 5.1.5
135Fe7d635F15F:2-183Ribosomal_S4,S4221 → 221.1 → 221.1.2
145Ge7d635G15G:72-267Brix7502 → 7502.1 → 7502.1.1
155Ie7d635I15I:65-379WD40, Beta-prop_NUP159_NUP2145 → 5.1 → 5.1.4
165Ke7d635K15K:57-182Fcf12006 → 2006.1 → 2006.1.4
17A4e7d63A41A4:29-374WD405 → 5.1 → 5.1.4
18A4e7d63A42A4:375-681,A4:731-7765.1.4.05 → 5.1 → 5.1.4
19A5e7d63A51A5:434-557Utp12109 → 109.54 → 109.54.1
20A5e7d63A52A5:3-3725.1.5.05 → 5.1 → 5.1.5
21A9e7d63A91A9:389-516109.54.1.0109 → 109.54 → 109.54.1
22AEe7d63AE1AE:3-421U3snoRNP10109 → 109.4 → 109.4.1
23AFe7d63AF1AF:34-364WD405 → 5.1 → 5.1.5
24AFe7d63AF2AF:2-33,AF:388-512UTP15_C109 → 109.54 → 109.54.1
25B1e7d63B11B1:735-856Utp12109 → 109.54 → 109.54.1
26B1e7d63B12B1:343-633,B1:675-734WD40,ANAPC4_WD405 → 5.1 → 5.1.4
27B1e7d63B13B1:2-223,B1:245-343WD40,ANAPC4_WD405 → 5.1 → 5.1.4
28B2e7d63B21B2:745-917Utp12109 → 109.54 → 109.54.1
29B2e7d63B22B2:5-385WD40, Beta-prop_WDR3_1st5 → 5.1 → 5.1.4
30B2e7d63B23B2:386-687WD40, Beta-prop_WDR3_2nd5 → 5.1 → 5.1.4
31B3e7d63B31B3:284-652WD405 → 5.1 → 5.1.4
32B3e7d63B32B3:653-817Utp13109 → 109.54 → 109.54.1
33B3e7d63B33B3:3-283WD405 → 5.1 → 5.1.3
34B6e7d63B61B6:1-196U3_assoc_6, HAT_PRP39_N109 → 109.4 → 109.4.1
35B8e7d63B81B8:235-591WD405 → 5.1 → 5.1.4
36BEe7d63BE1BE:350-670,BE:702-719WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd5 → 5.1 → 5.1.4
37BEe7d63BE2BE:705-736,BE:815-939Utp21109 → 109.54 → 109.54.1
38BEe7d63BE3BE:19-349ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st5 → 5.1 → 5.1.4
39RAe7d63RA1RA:2-19,RA:48-360Beta-prop_NOL10_N5 → 5.1 → 5.1.5
40RDe7d63RD1RD:1192-1224,RD:1457-1721HAT_PRP39_N109 → 109.4 → 109.4.1
41REe7d63RE1RE:100-356Nrap316 → 316.1 → 316.1.1
42REe7d63RE2RE:699-905Nrap_D4316 → 316.1 → 316.1.1
43REe7d63RE3RE:906-982,RE:1012-1091Nrap_D5102 → 102.1 → 102.1.3
44REe7d63RE4RE:515-698Nrap_D3304 → 304.20 → 304.20.1
45REe7d63RE5RE:1092-1237Nrap_D6304 → 304.20 → 304.20.1
46REe7d63RE6RE:357-514Nrap_D2102 → 102.1 → 102.1.3
47RFe7d63RF1RF:3-272RRP7,RRM_Rrp7304 → 304.9 → 304.9.1
48RGe7d63RG1RG:29-251EMG12488 → 2488.1 → 2488.1.1
49RHe7d63RH1RH:16-251EMG12488 → 2488.1 → 2488.1.1
50RJe7d63RJ1RJ:54-235AAA, GTP_EFTU2004 → 2004.1 → 2004.1.1
51RJe7d63RJ2RJ:929-1016RIBIOP_C1 → 1.1 → 1.1.7
52RJe7d63RJ3RJ:818-928RIBIOP_C1 → 1.1 → 1.1.8
53RJe7d63RJ4RJ:236-305,RJ:614-636,RJ:787-817AARP2CN1 → 1.1 → 1.1.7
54RKe7d63RK1RK:7-182,RK:287-366RTC328 → 328.6 → 328.6.1
55RKe7d63RK2RK:183-287RTC_insert2485 → 2485.2 → 2485.2.1
56RLe7d63RL1RL:498-661,RL:708-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
57RLe7d63RL2RL:211-433,RL:464-497Helicase_RecD2004 → 2004.1 → 2004.1.1
58RLe7d63RL3RL:3-210TmcA_N2004 → 2004.1 → 2004.1.1
59RLe7d63RL4RL:835-932tRNA_bind_2101 → 101.1 → 101.1.1
60RMe7d63RM1RM:498-661,RM:708-834GNAT_acetyltr_2213 → 213.1 → 213.1.1
61RMe7d63RM2RM:211-433,RM:467-497Helicase_RecD2004 → 2004.1 → 2004.1.1
62RMe7d63RM3RM:3-66,RM:92-210TmcA_N2004 → 2004.1 → 2004.1.1
63RMe7d63RM4RM:835-932tRNA_bind_2101 → 101.1 → 101.1.1
64RSe7d63RS1RS:209-465Bystin109 → 109.4 → 109.4.1
65RTe7d63RT1RT:178-271KH_PNO1_2nd327 → 327.11 → 327.11.2
66RTe7d63RT2RT:36-45,RT:90-177KH_8327 → 327.11 → 327.11.2
67RZe7d63RZ1RZ:1101-11552.1.1.02 → 2.1 → 2.1.1
68RZe7d63RZ2RZ:837-907HA2_N101 → 101.1 → 101.1.2
69RZe7d63RZ3RZ:587-836Helicase_C2004 → 2004.1 → 2004.1.1
70RZe7d63RZ4RZ:373-586DEAD2004 → 2004.1 → 2004.1.1
71RZe7d63RZ5RZ:908-947,RZ:977-1100HA2_C4156 → 4156.1 → 4156.1.1
72RZe7d63RZ6RZ:1156-12532.1.1.02 → 2.1 → 2.1.1
73Sce7d63Sc1Sc:3-82Ribosomal_S27e375 → 375.1 → 375.1.1
74SCe7d63SC1SC:114-223Ribosomal_S3Ae230 → 230.6 → 230.6.1
75SCe7d63SC2SC:15-113,SC:224-244Ribosomal_S3Ae239 → 239.5 → 239.5.1
76Sde7d63Sd1Sd:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
77SFe7d63SF1SF:176-241KOW,40S_S4_C4 → 4.1 → 4.1.1
78SFe7d63SF2SF:13-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
79SFe7d63SF3SF:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
80SGe7d63SG1SG:13-225Ribosomal_S7167 → 167.1 → 167.1.1
81SHe7d63SH1SH:1-143,SH:183-219Ribosomal_S6e239 → 239.1 → 239.1.1
82SIe7d63SI1SI:6-96,SI:116-119Ribosomal_S7e327 → 327.18 → 327.18.1
83SIe7d63SI2SI:116-189Ribosomal_S7e327 → 327.18 → 327.18.1
84SJe7d63SJ1SJ:2-121,SJ:151-196Ribosomal_S8e3174 → 3174.1 → 3174.1.1
85SKe7d63SK1SK:12-182Ribosomal_S4,S4221 → 221.1 → 221.1.2
86SMe7d63SM1SM:8-143Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
87SOe7d63SO1SO:9-82Ribosomal_S13_N101 → 101.40 → 101.40.1
88SOe7d63SO2SO:83-142Ribosomal_S15616 → 616.1 → 616.1.1
89SPe7d63SP1SP:11-128Ribosomal_S112484 → 2484.1 → 2484.1.1
90SRe7d63SR1SR:3-127Ribosomal_S9212 → 212.1 → 212.1.1
91STe7d63ST1ST:3-80,ST:101-124Ribosomal_S13102 → 102.2 → 102.2.1
92SUe7d63SU1SU:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
93SXe7d63SX1SX:67-130Ribosomal_S84988 → 4988.1 → 4988.1.1
94SXe7d63SX2SX:4-66Ribosomal_S8320 → 320.2 → 320.2.1
95SYe7d63SY1SY:42-144Ribosom_S12_S232 → 2.1 → 2.1.1
96SZe7d63SZ1SZ:4-105Ribosomal_S24e304 → 304.109 → 304.109.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors