PDB 7D63
ELECTRON MICROSCOPY0 chains96 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 3Bview chain
1 domainChain 3Cview chain
1 domainChain 3Fview chain
1 domainChain 3Gview chain
1 domainChain 3Hview chain
1 domainChain 5Cview chain
1 domainChain 5Fview chain
1 domainChain 5Gview chain
1 domainChain 5Iview chain
1 domainChain 5Kview chain
1 domainChain A4view chain
2 domainsChain A5view chain
2 domainsChain A9view chain
1 domainChain AEview chain
1 domainChain AFview chain
2 domainsChain B1view chain
3 domainsChain B2view chain
3 domainsChain B3view chain
3 domainsChain B6view chain
1 domainChain B8view chain
1 domainChain BEview chain
3 domainsChain RAview chain
1 domainChain RDview chain
1 domainChain REview chain
6 domainsChain RFview chain
1 domainChain RGview chain
1 domainChain RHview chain
1 domainChain RJview chain
4 domainsChain RKview chain
2 domainsChain RLview chain
4 domainsChain RMview chain
4 domainsChain RSview chain
1 domainChain RTview chain
2 domainsChain RZview chain
6 domainsChain Scview chain
1 domainChain SCview chain
2 domainsChain Sdview chain
1 domainChain SGview chain
1 domainChain SHview chain
1 domainChain SIview chain
2 domainsChain SJview chain
1 domainChain SKview chain
1 domainChain SMview chain
1 domainChain SOview chain
2 domainsChain SPview chain
1 domainChain SRview chain
1 domainChain STview chain
1 domainChain SUview chain
1 domainChain SXview chain
2 domainsChain SYview chain
1 domainChain SZview chain
1 domainAll Domains (96)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 3B | e7d633B1 | 3B:82-326 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 2 | 3C | e7d633C1 | 3C:86-322 | Fibrillarin | 2003 → 2003.1 → 2003.1.5 |
| 3 | 3D | e7d633D1 | 3D:166-300 | Nop | 606 → 606.1 → 606.1.1 |
| 4 | 3D | e7d633D2 | 3D:301-336,3D:370-415 | Nop | 102 → 102.1 → 102.1.4 |
| 5 | 3D | e7d633D3 | 3D:3-165 | NOP5NT | 3407 → 3407.1 → 3407.1.1 |
| 6 | 3E | e7d633E1 | 3E:3-18,3E:38-154 | NOP5NT, Nop5_56-rel_N_Arc | 3407 → 3407.1 → 3407.1.1 |
| 7 | 3E | e7d633E2 | 3E:285-403 | Nop | 102 → 102.1 → 102.1.4 |
| 8 | 3E | e7d633E3 | 3E:155-284 | Nop | 606 → 606.1 → 606.1.1 |
| 9 | 3F | e7d633F1 | 3F:58-77,3F:102-570 | WD40 | 5 → 5.1 → 5.1.5 |
| 10 | 3G | e7d633G1 | 3G:5-125 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 11 | 3H | e7d633H1 | 3H:5-125 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 12 | 5C | e7d635C1 | 5C:36-466,5C:544-553 | WD40,BING4CT | 5 → 5.1 → 5.1.5 |
| 13 | 5F | e7d635F1 | 5F:2-183 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 14 | 5G | e7d635G1 | 5G:72-267 | Brix | 7502 → 7502.1 → 7502.1.1 |
| 15 | 5I | e7d635I1 | 5I:65-379 | WD40, Beta-prop_NUP159_NUP214 | 5 → 5.1 → 5.1.4 |
| 16 | 5K | e7d635K1 | 5K:57-182 | Fcf1 | 2006 → 2006.1 → 2006.1.4 |
| 17 | A4 | e7d63A41 | A4:29-374 | WD40 | 5 → 5.1 → 5.1.4 |
| 18 | A4 | e7d63A42 | A4:375-681,A4:731-776 | 5.1.4.0 | 5 → 5.1 → 5.1.4 |
| 19 | A5 | e7d63A51 | A5:434-557 | Utp12 | 109 → 109.54 → 109.54.1 |
| 20 | A5 | e7d63A52 | A5:3-372 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 21 | A9 | e7d63A91 | A9:389-516 | 109.54.1.0 | 109 → 109.54 → 109.54.1 |
| 22 | AE | e7d63AE1 | AE:3-421 | U3snoRNP10 | 109 → 109.4 → 109.4.1 |
| 23 | AF | e7d63AF1 | AF:34-364 | WD40 | 5 → 5.1 → 5.1.5 |
| 24 | AF | e7d63AF2 | AF:2-33,AF:388-512 | UTP15_C | 109 → 109.54 → 109.54.1 |
| 25 | B1 | e7d63B11 | B1:735-856 | Utp12 | 109 → 109.54 → 109.54.1 |
| 26 | B1 | e7d63B12 | B1:343-633,B1:675-734 | WD40,ANAPC4_WD40 | 5 → 5.1 → 5.1.4 |
| 27 | B1 | e7d63B13 | B1:2-223,B1:245-343 | WD40,ANAPC4_WD40 | 5 → 5.1 → 5.1.4 |
| 28 | B2 | e7d63B21 | B2:745-917 | Utp12 | 109 → 109.54 → 109.54.1 |
| 29 | B2 | e7d63B22 | B2:5-385 | WD40, Beta-prop_WDR3_1st | 5 → 5.1 → 5.1.4 |
| 30 | B2 | e7d63B23 | B2:386-687 | WD40, Beta-prop_WDR3_2nd | 5 → 5.1 → 5.1.4 |
| 31 | B3 | e7d63B31 | B3:284-652 | WD40 | 5 → 5.1 → 5.1.4 |
| 32 | B3 | e7d63B32 | B3:653-817 | Utp13 | 109 → 109.54 → 109.54.1 |
| 33 | B3 | e7d63B33 | B3:3-283 | WD40 | 5 → 5.1 → 5.1.3 |
| 34 | B6 | e7d63B61 | B6:1-196 | U3_assoc_6, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 35 | B8 | e7d63B81 | B8:235-591 | WD40 | 5 → 5.1 → 5.1.4 |
| 36 | BE | e7d63BE1 | BE:350-670,BE:702-719 | WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd | 5 → 5.1 → 5.1.4 |
| 37 | BE | e7d63BE2 | BE:705-736,BE:815-939 | Utp21 | 109 → 109.54 → 109.54.1 |
| 38 | BE | e7d63BE3 | BE:19-349 | ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st | 5 → 5.1 → 5.1.4 |
| 39 | RA | e7d63RA1 | RA:2-19,RA:48-360 | Beta-prop_NOL10_N | 5 → 5.1 → 5.1.5 |
| 40 | RD | e7d63RD1 | RD:1192-1224,RD:1457-1721 | HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 41 | RE | e7d63RE1 | RE:100-356 | Nrap | 316 → 316.1 → 316.1.1 |
| 42 | RE | e7d63RE2 | RE:699-905 | Nrap_D4 | 316 → 316.1 → 316.1.1 |
| 43 | RE | e7d63RE3 | RE:906-982,RE:1012-1091 | Nrap_D5 | 102 → 102.1 → 102.1.3 |
| 44 | RE | e7d63RE4 | RE:515-698 | Nrap_D3 | 304 → 304.20 → 304.20.1 |
| 45 | RE | e7d63RE5 | RE:1092-1237 | Nrap_D6 | 304 → 304.20 → 304.20.1 |
| 46 | RE | e7d63RE6 | RE:357-514 | Nrap_D2 | 102 → 102.1 → 102.1.3 |
| 47 | RF | e7d63RF1 | RF:3-272 | RRP7,RRM_Rrp7 | 304 → 304.9 → 304.9.1 |
| 48 | RG | e7d63RG1 | RG:29-251 | EMG1 | 2488 → 2488.1 → 2488.1.1 |
| 49 | RH | e7d63RH1 | RH:16-251 | EMG1 | 2488 → 2488.1 → 2488.1.1 |
| 50 | RJ | e7d63RJ1 | RJ:54-235 | AAA, GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 51 | RJ | e7d63RJ2 | RJ:929-1016 | RIBIOP_C | 1 → 1.1 → 1.1.7 |
| 52 | RJ | e7d63RJ3 | RJ:818-928 | RIBIOP_C | 1 → 1.1 → 1.1.8 |
| 53 | RJ | e7d63RJ4 | RJ:236-305,RJ:614-636,RJ:787-817 | AARP2CN | 1 → 1.1 → 1.1.7 |
| 54 | RK | e7d63RK1 | RK:7-182,RK:287-366 | RTC | 328 → 328.6 → 328.6.1 |
| 55 | RK | e7d63RK2 | RK:183-287 | RTC_insert | 2485 → 2485.2 → 2485.2.1 |
| 56 | RL | e7d63RL1 | RL:498-661,RL:708-834 | GNAT_acetyltr_2 | 213 → 213.1 → 213.1.1 |
| 57 | RL | e7d63RL2 | RL:211-433,RL:464-497 | Helicase_RecD | 2004 → 2004.1 → 2004.1.1 |
| 58 | RL | e7d63RL3 | RL:3-210 | TmcA_N | 2004 → 2004.1 → 2004.1.1 |
| 59 | RL | e7d63RL4 | RL:835-932 | tRNA_bind_2 | 101 → 101.1 → 101.1.1 |
| 60 | RM | e7d63RM1 | RM:498-661,RM:708-834 | GNAT_acetyltr_2 | 213 → 213.1 → 213.1.1 |
| 61 | RM | e7d63RM2 | RM:211-433,RM:467-497 | Helicase_RecD | 2004 → 2004.1 → 2004.1.1 |
| 62 | RM | e7d63RM3 | RM:3-66,RM:92-210 | TmcA_N | 2004 → 2004.1 → 2004.1.1 |
| 63 | RM | e7d63RM4 | RM:835-932 | tRNA_bind_2 | 101 → 101.1 → 101.1.1 |
| 64 | RS | e7d63RS1 | RS:209-465 | Bystin | 109 → 109.4 → 109.4.1 |
| 65 | RT | e7d63RT1 | RT:178-271 | KH_PNO1_2nd | 327 → 327.11 → 327.11.2 |
| 66 | RT | e7d63RT2 | RT:36-45,RT:90-177 | KH_8 | 327 → 327.11 → 327.11.2 |
| 67 | RZ | e7d63RZ1 | RZ:1101-1155 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 68 | RZ | e7d63RZ2 | RZ:837-907 | HA2_N | 101 → 101.1 → 101.1.2 |
| 69 | RZ | e7d63RZ3 | RZ:587-836 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 70 | RZ | e7d63RZ4 | RZ:373-586 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 71 | RZ | e7d63RZ5 | RZ:908-947,RZ:977-1100 | HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 72 | RZ | e7d63RZ6 | RZ:1156-1253 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 73 | Sc | e7d63Sc1 | Sc:3-82 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 74 | SC | e7d63SC1 | SC:114-223 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 75 | SC | e7d63SC2 | SC:15-113,SC:224-244 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 76 | Sd | e7d63Sd1 | Sd:5-67 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 77 | SF | e7d63SF1 | SF:176-241 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 78 | SF | e7d63SF2 | SF:13-116 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 79 | SF | e7d63SF3 | SF:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 80 | SG | e7d63SG1 | SG:13-225 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 81 | SH | e7d63SH1 | SH:1-143,SH:183-219 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 82 | SI | e7d63SI1 | SI:6-96,SI:116-119 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 83 | SI | e7d63SI2 | SI:116-189 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 84 | SJ | e7d63SJ1 | SJ:2-121,SJ:151-196 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 85 | SK | e7d63SK1 | SK:12-182 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 86 | SM | e7d63SM1 | SM:8-143 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 87 | SO | e7d63SO1 | SO:9-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 88 | SO | e7d63SO2 | SO:83-142 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 89 | SP | e7d63SP1 | SP:11-128 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 90 | SR | e7d63SR1 | SR:3-127 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 91 | ST | e7d63ST1 | ST:3-80,ST:101-124 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 92 | SU | e7d63SU1 | SU:2-144 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 93 | SX | e7d63SX1 | SX:67-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 94 | SX | e7d63SX2 | SX:4-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 95 | SY | e7d63SY1 | SY:42-144 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 96 | SZ | e7d63SZ1 | SZ:4-105 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors