PDB 7DKF
ELECTRON MICROSCOPY0 chains91 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain 12view chain
1 domainChain 22view chain
1 domainChain 32view chain
1 domainChain 42view chain
1 domainChain 52view chain
1 domainChain 62view chain
1 domainChain 72view chain
1 domainChain 92view chain
2 domainsChain A1view chain
2 domainsChain A2view chain
6 domainsChain A3view chain
1 domainChain B1view chain
2 domainsChain b2view chain
1 domainChain B2view chain
3 domainsChain B3view chain
2 domainsChain C1view chain
2 domainsChain C2view chain
1 domainChain C3view chain
1 domainChain D1view chain
2 domainsChain D2view chain
1 domainChain D3view chain
1 domainChain E1view chain
1 domainChain E2view chain
1 domainChain E3view chain
1 domainChain F1view chain
1 domainChain f2view chain
1 domainChain F3view chain
1 domainChain G1view chain
1 domainChain g2view chain
1 domainChain G2view chain
1 domainChain G3view chain
1 domainChain H1view chain
1 domainChain H2view chain
1 domainChain H3view chain
1 domainChain I1view chain
1 domainChain i2view chain
1 domainChain I2view chain
1 domainChain I3view chain
1 domainChain J1view chain
1 domainChain j2view chain
1 domainChain J2view chain
1 domainChain J3view chain
1 domainChain K1view chain
1 domainChain K2view chain
1 domainChain K3view chain
1 domainChain L2view chain
1 domainChain L3view chain
1 domainChain M1view chain
2 domainsChain M2view chain
1 domainChain M3view chain
1 domainChain N1view chain
2 domainsChain N2view chain
1 domainChain O1view chain
2 domainsChain O2view chain
1 domainChain P1view chain
2 domainsChain Q1view chain
2 domainsChain Q2view chain
1 domainChain R1view chain
1 domainChain R2view chain
1 domainChain S1view chain
1 domainChain S2view chain
1 domainChain T1view chain
1 domainChain U1view chain
1 domainChain U2view chain
1 domainChain V1view chain
1 domainChain V2view chain
1 domainChain W1view chain
1 domainChain W2view chain
1 domainChain X2view chain
1 domainChain Y2view chain
1 domainAll Domains (91)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 12 | e7dkf121 | 12:1-317 | NADHdh | 3281 → 3281.1 → 3281.1.2 |
| 2 | 22 | e7dkf221 | 22:2-345 | Proton_antipo_M,NADH_dehy_S2_C | 3281 → 3281.1 → 3281.1.1 |
| 3 | 32 | e7dkf321 | 32:1-112 | Oxidored_q4 | 3456 → 3456.1 → 3456.1.1 |
| 4 | 42 | e7dkf421 | 42:1-458 | Proton_antipo_M,Oxidored_q5_N | 3281 → 3281.1 → 3281.1.1 |
| 5 | 52 | e7dkf521 | 52:2-97 | Oxidored_q2 | 3843 → 3843.1 → 3843.1.1 |
| 6 | 62 | e7dkf621 | 62:1-606 | Proton_antipo_M,Proton_antipo_N,NADH5_C | 3281 → 3281.1 → 3281.1.1 |
| 7 | 72 | e7dkf721 | 72:1-172 | Oxidored_q3 | 3579 → 3579.1 → 3579.1.1 |
| 8 | 82 | e7dkf821 | 82:360-458 | NADH_4Fe-4S | 633 → 633.11 → 633.11.1 |
| 9 | 82 | e7dkf822 | 82:32-273 | Complex1_51K | 4335 → 4335.1 → 4335.1.1 |
| 10 | 82 | e7dkf823 | 82:274-359 | SLBB_2 | 221 → 221.1 → 221.1.4 |
| 11 | 92 | e7dkf921 | 92:40-126 | 2Fe-2S_thioredx | 3697 → 3697.1 → 3697.1.1 |
| 12 | 92 | e7dkf922 | 92:127-246 | 2Fe-2S_thioredx | 2485 → 2485.1 → 2485.1.1 |
| 13 | A1 | e7dkfA11 | A1:1-233 | Peptidase_M16,Peptidase_M16_C | 309 → 309.1 → 309.1.1 |
| 14 | A1 | e7dkfA12 | A1:234-446 | Peptidase_M16_C | 309 → 309.1 → 309.1.1 |
| 15 | A2 | e7dkfA21 | A2:301-370,A2:519-716 | Molybdopterin,NADH_dhqG_C | 2003 → 2003.2 → 2003.2.1 |
| 16 | A2 | e7dkfA22 | A2:241-300 | NDSU1_4Fe-4S | 1001 → 1001.1 → 1001.1.1 |
| 17 | A2 | e7dkfA23 | A2:160-240 | Nqo3_Fer4 | 205 → 205.1 → 205.1.1 |
| 18 | A2 | e7dkfA24 | A2:105-159 | NADH-G_4Fe-4S_3 | 5100 → 5100.1 → 5100.1.1 |
| 19 | A2 | e7dkfA25 | A2:371-518 | Molybdopterin | 2003 → 2003.2 → 2003.2.1 |
| 20 | A2 | e7dkfA26 | A2:29-104 | Fer2_4 | 221 → 221.1 → 221.1.1 |
| 21 | A3 | e7dkfA31 | A3:1-514 | COX1 | 5038 → 5038.1 → 5038.1.1 |
| 22 | B1 | e7dkfB11 | B1:21-235 | Peptidase_M16 | 309 → 309.1 → 309.1.1 |
| 23 | B1 | e7dkfB12 | B1:236-439 | Peptidase_M16_C | 309 → 309.1 → 309.1.1 |
| 24 | b2 | e7dkfb21 | b2:51-189 | NDUF_B5 | 1127 → 1127.1 → 1127.1.1 |
| 25 | B2 | e7dkfB21 | B2:162-359 | Complex1_49kDa | 4025 → 4025.1 → 4025.1.1 |
| 26 | B2 | e7dkfB22 | B2:119-161,B2:360-432 | Complex1_49kDa | 244 → 244.4 → 244.4.1 |
| 27 | B2 | e7dkfB23 | B2:79-118,B2:433-463 | Complex1_49kDa | 244 → 244.4 → 244.4.1 |
| 28 | B3 | e7dkfB31 | B3:1-90 | COX2_TM | 5040 → 5040.1 → 5040.1.1 |
| 29 | B3 | e7dkfB32 | B3:91-227 | COX2 | 3156 → 3156.1 → 3156.1.1 |
| 30 | C1 | e7dkfC11 | C1:1-260 | Cytochrome_B, Cytochrom_B_N_2 | 5069 → 5069.1 → 5069.1.1 |
| 31 | C1 | e7dkfC12 | C1:261-379 | Cytochrom_B_C | 5068 → 5068.1 → 5068.1.1 |
| 32 | C2 | e7dkfC21 | C2:45-252 | Complex1_30kDa | 4272 → 4272.1 → 4272.1.1 |
| 33 | C3 | e7dkfC31 | C3:1-261 | COX3 | 5039 → 5039.1 → 5039.1.1 |
| 34 | D1 | e7dkfD11 | D1:1-195 | Cytochrom_C1 | 107 → 107.1 → 107.1.1 |
| 35 | D1 | e7dkfD12 | D1:196-241 | 5013.1.1.0 | 5013 → 5013.1 → 5013.1.1 |
| 36 | D2 | e7dkfD21 | D2:64-215 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 37 | D3 | e7dkfD31 | D3:4-147 | COX4 | 5003 → 5003.1 → 5003.1.1 |
| 38 | E1 | e7dkfE11 | E1:1-75 | UCR_TM | 5014 → 5014.1 → 5014.1.1 |
| 39 | E2 | e7dkfE21 | E2:37-212 | Fer4+Fer4_7 | 205 → 205.1 → 205.1.1 |
| 40 | E3 | e7dkfE31 | E3:1-109 | COX5A | 109 → 109.7 → 109.7.1 |
| 41 | F1 | e7dkfF11 | F1:5-110 | UCR_14kD | 5070 → 5070.1 → 5070.1.1 |
| 42 | f2 | e7dkff21 | f2:10-176 | Complex1_LYR | 1128 → 1128.1 → 1128.1.1 |
| 43 | F3 | e7dkfF31 | F3:1-98 | COX5B | 375 → 375.1 → 375.1.8 |
| 44 | G1 | e7dkfG11 | G1:1-81 | UcrQ | 5016 → 5016.1 → 5016.1.1 |
| 45 | g2 | e7dkfg21 | g2:4-176 | NDUFB10 | 1130 → 1130.1 → 1130.1.1 |
| 46 | G2 | e7dkfG21 | G2:53-175 | NDUS4 | 3203 → 3203.1 → 3203.1.1 |
| 47 | G3 | e7dkfG31 | G3:1-84 | COX6A | 5004 → 5004.1 → 5004.1.1 |
| 48 | H1 | e7dkfH11 | H1:15-78 | UCR_hinge | 5071 → 5071.1 → 5071.1.1 |
| 49 | H2 | e7dkfH21 | H2:2-97 | Ndufs5 | 5071 → 5071.2 → 5071.2.1 |
| 50 | H3 | e7dkfH31 | H3:11-85 | COX6B | 540 → 540.1 → 540.1.1 |
| 51 | I1 | e7dkfI11 | I1:46-78 | Ubiq-Cytc-red_N | 852 → 852.1 → 852.1.1 |
| 52 | i2 | e7dkfi21 | i2:36-73 | NADH_dh_m_C1 | 1124 → 1124.1 → 1124.1.1 |
| 53 | I2 | e7dkfI21 | I2:51-121 | zf-CHCC | 375 → 375.1 → 375.1.8 |
| 54 | I3 | e7dkfI31 | I3:1-73 | COX6C | 5005 → 5005.1 → 5005.1.1 |
| 55 | J1 | e7dkfJ11 | J1:1-62 | UCR_UQCRX_QCR9 | 5017 → 5017.1 → 5017.1.1 |
| 56 | j2 | e7dkfj21 | j2:7-119 | NDUF_C2 | 1131 → 1131.1 → 1131.1.1 |
| 57 | J2 | e7dkfJ21 | J2:2-70 | MWFE | 1126 → 1126.1 → 1126.1.1 |
| 58 | J3 | e7dkfJ31 | J3:1-56 | COX7a | 5006 → 5006.1 → 5006.1.1 |
| 59 | K1 | e7dkfK11 | K1:15-36 | UCR_6-4kD | 5018 → 5018.1 → 5018.1.1 |
| 60 | K2 | e7dkfK21 | K2:14-97 | L51_S25_CI-B8 | 2485 → 2485.1 → 2485.1.1 |
| 61 | K3 | e7dkfK31 | K3:6-54 | COX7B | 5007 → 5007.1 → 5007.1.1 |
| 62 | L2 | e7dkfL21 | L2:5-84 | NADHdh_A3 | 1122 → 1122.1 → 1122.1.1 |
| 63 | L3 | e7dkfL31 | L3:1-47 | COX7C | 5008 → 5008.1 → 5008.1.1 |
| 64 | M1 | e7dkfM11 | M1:1-233 | Peptidase_M16,Peptidase_M16_C | 309 → 309.1 → 309.1.1 |
| 65 | M1 | e7dkfM12 | M1:234-446 | Peptidase_M16_C | 309 → 309.1 → 309.1.1 |
| 66 | M2 | e7dkfM21 | M2:6-85 | PP-binding | 132 → 132.1 → 132.1.1 |
| 67 | M3 | e7dkfM31 | M3:1-43 | COX8 | 5009 → 5009.1 → 5009.1.1 |
| 68 | N1 | e7dkfN11 | N1:21-235 | Peptidase_M16 | 309 → 309.1 → 309.1.1 |
| 69 | N1 | e7dkfN12 | N1:236-439 | Peptidase_M16_C | 309 → 309.1 → 309.1.1 |
| 70 | N2 | e7dkfN21 | N2:6-116 | ETC_C1_NDUFA5 | 6004 → 6004.1 → 6004.1.1 |
| 71 | O1 | e7dkfO11 | O1:1-260 | Cytochrome_B, Cytochrom_B_N_2 | 5069 → 5069.1 → 5069.1.1 |
| 72 | O1 | e7dkfO12 | O1:261-379 | Cytochrom_B_C | 5068 → 5068.1 → 5068.1.1 |
| 73 | O2 | e7dkfO21 | O2:15-128 | Complex1_LYR_2 | 1128 → 1128.1 → 1128.1.1 |
| 74 | P1 | e7dkfP11 | P1:196-241 | 5013.1.1.0 | 5013 → 5013.1 → 5013.1.1 |
| 75 | P1 | e7dkfP12 | P1:1-195 | Cytochrom_C1 | 107 → 107.1 → 107.1.1 |
| 76 | Q1 | e7dkfQ11 | Q1:1-69 | UCR_TM | 5014 → 5014.1 → 5014.1.1 |
| 77 | Q1 | e7dkfQ12 | Q1:70-196 | Rieske | 66 → 66.1 → 66.1.1 |
| 78 | Q2 | e7dkfQ21 | Q2:5-172 | CHCH | 568 → 568.1 → 568.1.1 |
| 79 | R1 | e7dkfR11 | R1:5-110 | UCR_14kD | 5070 → 5070.1 → 5070.1.1 |
| 80 | R2 | e7dkfR21 | R2:41-360 | Epimerase | 2003 → 2003.1 → 2003.1.1 |
| 81 | S1 | e7dkfS11 | S1:1-81 | UcrQ | 5016 → 5016.1 → 5016.1.1 |
| 82 | S2 | e7dkfS21 | S2:24-342 | dNK | 2004 → 2004.1 → 2004.1.1 |
| 83 | T1 | e7dkfT11 | T1:15-78 | UCR_hinge | 5071 → 5071.1 → 5071.1.1 |
| 84 | U1 | e7dkfU11 | U1:46-78 | Ubiq-Cytc-red_N | 852 → 852.1 → 852.1.1 |
| 85 | U2 | e7dkfU21 | U2:42-144 | NDUFA12 | 1129 → 1129.1 → 1129.1.1 |
| 86 | V1 | e7dkfV11 | V1:1-62 | UCR_UQCRX_QCR9 | 5017 → 5017.1 → 5017.1.1 |
| 87 | V2 | e7dkfV21 | V2:7-144 | GRIM-19 | 1132 → 1132.1 → 1132.1.1 |
| 88 | W1 | e7dkfW11 | W1:15-36 | UCR_6-4kD | 5018 → 5018.1 → 5018.1.1 |
| 89 | W2 | e7dkfW21 | W2:71-156 | PP-binding | 132 → 132.1 → 132.1.1 |
| 90 | X2 | e7dkfX21 | X2:8-56 | NADH_oxidored | 1125 → 1125.1 → 1125.1.1 |
| 91 | Y2 | e7dkfY21 | Y2:38-94 | NADH_B2 | 1123 → 1123.1 → 1123.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors