PDB 7DN3
ELECTRON MICROSCOPY0 chains37 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainse7dn3A1(A:1-231,A:276-418,A:614-615,A:629-632,A:658-658,A:727-728,A:752-755,A:909-911,A:944-946,A:994-997,A:1009-1011)e7dn3A2(A:419-448,A:523-604)e7dn3A3(A:449-522)e7dn3A4(A:605-613,A:616-628,A:633-657,A:659-726,A:729-751,A:756-772)e7dn3A5(A:773-908,A:912-943,A:947-970)e7dn3A6(A:971-993,A:998-1008,A:1012-1097)e7dn3A7(A:1098-1118)e7dn3A8(A:1119-1146)e7dn3A9(A:1147-1213,A:1316-1365)
Chain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
5 domainsChain Pview chain
1 domainAll Domains (37)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e7dn3A1 | A:1-231,A:276-418,A:614-615,A:629-632,A:658-658,A:727-728,A:752-755,A:909-911,A:944-946,A:994-997,A:1009-1011 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e7dn3A2 | A:419-448,A:523-604 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 3 | A | e7dn3A3 | A:449-522 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e7dn3A4 | A:605-613,A:616-628,A:633-657,A:659-726,A:729-751,A:756-772 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e7dn3A5 | A:773-908,A:912-943,A:947-970 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e7dn3A6 | A:971-993,A:998-1008,A:1012-1097 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 7 | A | e7dn3A7 | A:1098-1118 | 4954.1.1.0 | 4954 → 4954.1 → 4954.1.1 |
| 8 | A | e7dn3A8 | A:1119-1146 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | A | e7dn3A9 | A:1147-1213,A:1316-1365 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 10 | B | e7dn3B1 | B:767-891 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | B | e7dn3B2 | B:1015-1132 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 12 | B | e7dn3B3 | B:590-729 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 13 | B | e7dn3B4 | B:730-766,B:892-1014 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e7dn3B5 | B:499-589 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e7dn3B6 | B:185-360 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 16 | B | e7dn3B7 | B:23-184,B:361-498 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 17 | C | e7dn3C1 | C:85-227 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | C | e7dn3C2 | C:7-84,C:228-343 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | D | e7dn3D1 | D:1-122 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e7dn3E1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 21 | E | e7dn3E2 | E:6-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 22 | F | e7dn3F1 | F:51-126 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e7dn3G1 | G:2-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 24 | G | e7dn3G2 | G:79-162,G:184-201 | RNA_pol_Rbc25 | 2 → 2.1 → 2.1.1 |
| 25 | H | e7dn3H1 | H:3-148 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e7dn3I1 | I:2-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | J | e7dn3J1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 28 | K | e7dn3K1 | K:24-126 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 29 | L | e7dn3L1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 30 | M | e7dn3M1 | M:10-152,M:188-214 | RPC5 | 59 → 59.1 → 59.1.1 |
| 31 | N | e7dn3N1 | N:250-277,N:326-389 | RNA_pol_Rpc4 | 59 → 59.1 → 59.1.1 |
| 32 | O | e7dn3O1 | O:85-177 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 33 | O | e7dn3O2 | O:337-404,O:426-429 | POLR3C_WHD | 101 → 101.1 → 101.1.2 |
| 34 | O | e7dn3O3 | O:427-465,O:491-534 | RPC3_helical | 192 → 192.24 → 192.24.1 |
| 35 | O | e7dn3O4 | O:229-336 | RNA_pol_Rpc82 | 101 → 101.1 → 101.1.2 |
| 36 | O | e7dn3O5 | O:2-84 | HTH_9 | 101 → 101.1 → 101.1.2 |
| 37 | P | e7dn3P1 | P:186-315 | RNA_pol_Rpc34 | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors