PDB 7LBM
ELECTRON MICROSCOPY0 chains80 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (80)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e7lbm01 | 0:13-314,0:335-408,0:429-458 | 5.1.5.3 | 5 → 5.1 → 5.1.5 |
| 2 | 1 | e7lbm11 | 1:1-220 | Med23 | 109 → 109.4 → 109.4.1 |
| 3 | 1 | e7lbm12 | 1:267-468 | Med23 | 109 → 109.4 → 109.4.1 |
| 4 | 1 | e7lbm13 | 1:469-752 | Med23 | 109 → 109.4 → 109.4.1 |
| 5 | 1 | e7lbm14 | 1:753-1034 | Med23 | 109 → 109.4 → 109.4.1 |
| 6 | 1 | e7lbm15 | 1:1035-1334 | Med23 | 109 → 109.4 → 109.4.1 |
| 7 | 3 | e7lbm31 | 3:15-230 | Med25_VWA | 2006 → 2006.1 → 2006.1.6 |
| 8 | a | e7lbma1 | a:51-238 | Ssl1 | 2006 → 2006.1 → 2006.1.6 |
| 9 | a | e7lbma2 | a:239-316 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 10 | a | e7lbma3 | a:317-387 | C1_4 | 376 → 376.1 → 376.1.2 |
| 11 | A | e7lbmA1 | A:10-157,A:183-350 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 12 | A | e7lbmA2 | A:389-449 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 13 | A | e7lbmA3 | A:1083-1135,A:1361-1485,A:1616-1629,A:1650-1657 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 14 | A | e7lbmA4 | A:351-388,A:450-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | A | e7lbmA5 | A:1165-1297 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 16 | A | e7lbmA6 | A:1136-1164,A:1298-1360 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 17 | A | e7lbmA7 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 18 | A | e7lbmA8 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 19 | A | e7lbmA9 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 20 | b | e7lbmb1 | b:265-292 | Tfb4 | 375 → 375.1 → 375.1.1 |
| 21 | b | e7lbmb2 | b:8-72,b:95-264 | Tfb4 | 2006 → 2006.1 → 2006.1.6 |
| 22 | B | e7lbmB1 | B:769-805,B:930-1053 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 23 | B | e7lbmB2 | B:14-67,B:87-200,B:392-528 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 24 | B | e7lbmB3 | B:619-768 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 25 | B | e7lbmB4 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 26 | B | e7lbmB5 | B:1054-1174 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 27 | B | e7lbmB6 | B:201-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 28 | B | e7lbmB7 | B:529-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 29 | c | e7lbmc1 | c:2-67 | Tfb5 | 4340 → 4340.1 → 4340.1.1 |
| 30 | C | e7lbmC1 | C:1-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 31 | C | e7lbmC2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 32 | d | e7lbmd1 | d:1-69 | zf-C3HC4_5 | 376 → 376.1 → 376.1.1 |
| 33 | d | e7lbmd2 | d:70-149 | MAT1 | 386 → 386.1 → 386.1.1 |
| 34 | D | e7lbmD1 | D:14-142 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 35 | e | e7lbme1 | e:10-312 | Pkinase | 206 → 206.1 → 206.1.1 |
| 36 | E | e7lbmE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 37 | E | e7lbmE2 | E:1-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 38 | f | e7lbmf1 | f:162-284 | Cyclin_C_2 | 101 → 101.1 → 101.1.10 |
| 39 | f | e7lbmf2 | f:1-161 | Cyclin_N | 101 → 101.1 → 101.1.10 |
| 40 | F | e7lbmF1 | F:42-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 41 | g | e7lbmg1 | g:8-137 | Med6 | 3195 → 3195.1 → 3195.1.1 |
| 42 | G | e7lbmG1 | G:78-171 | S1 | 2 → 2.1 → 2.1.1 |
| 43 | G | e7lbmG2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 44 | h | e7lbmh1 | h:4-78,h:102-160 | Med8 | 3560 → 3560.1 → 3560.1.1 |
| 45 | H | e7lbmH1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 46 | I | e7lbmI1 | I:10-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 47 | I | e7lbmI2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 48 | J | e7lbmJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 49 | k | e7lbmk1 | k:16-203 | Med18 | 868 → 868.1 → 868.1.1 |
| 50 | K | e7lbmK1 | K:1-116 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 51 | l | e7lbml1 | l:3-204 | Med20 | 868 → 868.1 → 868.1.1 |
| 52 | L | e7lbmL1 | L:13-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 53 | m | e7lbmm1 | m:11-140 | Med22 | 3559 → 3559.1 → 3559.1.1 |
| 54 | M | e7lbmM1 | M:322-376 | TFIIA | 74 → 74.1 → 74.1.1 |
| 55 | M | e7lbmM2 | M:9-51,M:308-321 | TFIIA | 104 → 104.1 → 104.1.1 |
| 56 | N | e7lbmN1 | N:54-99 | TFIIA_gamma_C | 74 → 74.1 → 74.1.1 |
| 57 | N | e7lbmN2 | N:1-53 | TFIIA_gamma_N | 104 → 104.1 → 104.1.1 |
| 58 | o | e7lbmo1 | o:42-149 | Med28 | 4207 → 4207.1 → 4207.1.1 |
| 59 | O | e7lbmO1 | O:208-316 | TFIIB | 101 → 101.1 → 101.1.10 |
| 60 | O | e7lbmO2 | O:105-207 | TFIIB | 101 → 101.1 → 101.1.10 |
| 61 | O | e7lbmO3 | O:7-54 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 62 | P | e7lbmP1 | P:153-255 | TBP | 331 → 331.1 → 331.1.1 |
| 63 | P | e7lbmP2 | P:256-337 | TBP | 331 → 331.1 → 331.1.1 |
| 64 | Q | e7lbmQ1 | Q:104-201 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 65 | Q | e7lbmQ2 | Q:11-103 | TFIIE_alpha | 101 → 101.1 → 101.1.2 |
| 66 | R | e7lbmR1 | R:147-207 | TFA2_Winged_2 | 101 → 101.1 → 101.1.2 |
| 67 | R | e7lbmR2 | R:75-146 | TFIIE_beta | 101 → 101.1 → 101.1.2 |
| 68 | R | e7lbmR3 | R:208-239 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 69 | S | e7lbmS1 | S:19-54,S:93-183 | TFIIF_alpha | 59 → 59.1 → 59.1.1 |
| 70 | t | e7lbmt1 | t:74-172 | Med7 | 4207 → 4207.1 → 4207.1.2 |
| 71 | T | e7lbmT1 | T:2-119 | TFIIF_beta_N | 59 → 59.1 → 59.1.1 |
| 72 | T | e7lbmT2 | T:175-238 | TFIIF_beta | 101 → 101.1 → 101.1.2 |
| 73 | W | e7lbmW1 | W:493-718 | Helicase_C, ERCC3_RAD25_C | 2004 → 2004.1 → 2004.1.1 |
| 74 | W | e7lbmW2 | W:244-492 | ResIII | 2004 → 2004.1 → 2004.1.1 |
| 75 | x | e7lbmx1 | x:3-29,x:50-133 | Med21 | 4207 → 4207.1 → 4207.1.1 |
| 76 | X | e7lbmX1 | X:1-243 | DEAD_2 | 2004 → 2004.1 → 2004.1.1 |
| 77 | X | e7lbmX2 | X:447-760 | Helicase_C_2 | 2004 → 2004.1 → 2004.1.1 |
| 78 | X | e7lbmX3 | X:244-446 | HBB | 3636 → 3636.1 → 3636.1.1 |
| 79 | y | e7lbmy1 | y:13-105 | Med31 | 3548 → 3548.1 → 3548.1.1 |
| 80 | Z | e7lbmZ1 | Z:388-459 | Tfb2_C | 4340 → 4340.1 → 4340.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors