ECODEvolutionary Classification of Protein Domains

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PDB 7LYP

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e7lypA1(A:27-143,A:165-242,A:263-308)e7lypA2(A:309-328,A:530-620,A:641-694)e7lypA3(A:695-827,A:854-1147)e7lypA4(A:329-529)

Chain Bview chain

4 domains

e7lypB1(B:695-827,B:854-1147)e7lypB2(B:309-328,B:530-620,B:641-694)e7lypB3(B:329-529)e7lypB4(B:27-143,B:164-242,B:263-308)

Chain Cview chain

4 domains

e7lypC1(C:329-529)e7lypC2(C:309-328,C:530-620,C:641-694)e7lypC3(C:27-143,C:165-242,C:263-308)e7lypC4(C:695-827,C:855-1147)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7lypA1	A:27-143,A:165-242,A:263-308	bCoV_S1_N	10 → 10.1 → 10.1.1
2	A	e7lypA2	A:309-328,A:530-620,A:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
3	A	e7lypA3	A:695-827,A:854-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
4	A	e7lypA4	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
5	B	e7lypB1	B:695-827,B:854-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
6	B	e7lypB2	B:309-328,B:530-620,B:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
7	B	e7lypB3	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
8	B	e7lypB4	B:27-143,B:164-242,B:263-308	bCoV_S1_N	10 → 10.1 → 10.1.1
9	C	e7lypC1	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
10	C	e7lypC2	C:309-328,C:530-620,C:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
11	C	e7lypC3	C:27-143,C:165-242,C:263-308	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e7lypC4	C:695-827,C:855-1147	CoV_S2	1042 → 1042.1 → 1042.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors