ECODEvolutionary Classification of Protein Domains

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PDB 7NDA

ELECTRON MICROSCOPY0 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7ndaA1	A:695-826,A:853-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
2	A	e7ndaA2	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
3	A	e7ndaA3	A:309-328,A:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
4	A	e7ndaA4	A:27-143,A:165-245,A:265-308	bCoV_S1_N	10 → 10.1 → 10.1.1
5	B	e7ndaB1	B:309-328,B:530-620,B:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
6	B	e7ndaB2	B:27-143,B:165-245,B:265-308	bCoV_S1_N	10 → 10.1 → 10.1.1
7	B	e7ndaB3	B:695-826,B:853-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
8	B	e7ndaB4	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
9	C	e7ndaC1	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
10	C	e7ndaC2	C:309-328,C:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
11	C	e7ndaC3	C:695-826,C:853-1147	CoV_S2	1042 → 1042.1 → 1042.1.1
12	C	e7ndaC4	C:27-143,C:165-245,C:265-308	bCoV_S1_N	10 → 10.1 → 10.1.1
13	H	e7ndaH1	H:2-123	V-set	11 → 11.1 → 11.1.1
14	H	e7ndaH2	H:124-224	C1-set	11 → 11.1 → 11.1.1
15	L	e7ndaL1	L:109-214	C1-set	11 → 11.1 → 11.1.1
16	L	e7ndaL2	L:1-108	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors