PDB 7NKY
ELECTRON MICROSCOPY0 chains48 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
9 domainsChain bview chain
1 domainChain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Qview chain
3 domainsChain Yview chain
1 domainChain Zview chain
2 domainsAll Domains (48)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e7nkya1 | a:45-132 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e7nkyA1 | A:663-871 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e7nkyA2 | A:520-662 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 4 | A | e7nkyA3 | A:1132-1242 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 5 | A | e7nkyA4 | A:337-374,A:436-519 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e7nkyA5 | A:375-435 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 7 | A | e7nkyA6 | A:3-336 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 8 | A | e7nkyA7 | A:872-1059 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 9 | A | e7nkyA8 | A:1060-1102,A:1301-1454 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 10 | A | e7nkyA9 | A:1103-1131,A:1243-1300 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 11 | b | e7nkyb1 | b:20-102 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 12 | B | e7nkyB1 | B:20-70,B:90-134,B:164-218,B:405-541 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 13 | B | e7nkyB2 | B:542-630 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 14 | B | e7nkyB3 | B:1098-1223 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | B | e7nkyB4 | B:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 16 | B | e7nkyB5 | B:219-404 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 17 | B | e7nkyB6 | B:814-850,B:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 18 | B | e7nkyB7 | B:631-813 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 19 | c | e7nkyc1 | c:16-117 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 20 | C | e7nkyC1 | C:42-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 21 | C | e7nkyC2 | C:4-41,C:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | d | e7nkyd1 | d:28-122 | Histone | 148 → 148.1 → 148.1.1 |
| 23 | D | e7nkyD1 | D:1-71,D:131-221 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 24 | e | e7nkye1 | e:39-132 | Histone | 148 → 148.1 → 148.1.1 |
| 25 | E | e7nkyE1 | E:2-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 26 | E | e7nkyE2 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 27 | f | e7nkyf1 | f:25-102 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 28 | F | e7nkyF1 | F:69-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 29 | g | e7nkyg1 | g:14-110 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 30 | G | e7nkyG1 | G:1-80 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 31 | G | e7nkyG2 | G:81-171 | S1 | 2 → 2.1 → 2.1.1 |
| 32 | h | e7nkyh1 | h:29-121 | Histone | 148 → 148.1 → 148.1.1 |
| 33 | H | e7nkyH1 | H:2-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 34 | I | e7nkyI1 | I:50-120 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 35 | I | e7nkyI2 | I:2-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 36 | J | e7nkyJ1 | J:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 37 | K | e7nkyK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 38 | L | e7nkyL1 | L:27-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 39 | O | e7nkyO1 | O:226-372 | PH1_SSRP1-like | 220 → 220.1 → 220.1.1 |
| 40 | O | e7nkyO2 | O:2-111 | POB3_N | 220 → 220.1 → 220.1.1 |
| 41 | O | e7nkyO3 | O:373-474 | Rttp106-like_middle | 220 → 220.1 → 220.1.1 |
| 42 | O | e7nkyO4 | O:106-179 | SSrecog | 220 → 220.1 → 220.1.1 |
| 43 | Q | e7nkyQ1 | Q:653-828 | PH_SPT16 | 220 → 220.1 → 220.1.1 |
| 44 | Q | e7nkyQ2 | Q:829-968 | Rttp106-like_middle | 220 → 220.1 → 220.1.1 |
| 45 | Q | e7nkyQ3 | Q:536-652 | SPT16 | 220 → 220.1 → 220.1.1 |
| 46 | Y | e7nkyY1 | Y:3-100 | Spt4 | 375 → 375.1 → 375.1.1 |
| 47 | Z | e7nkyZ1 | Z:285-377 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 48 | Z | e7nkyZ2 | Z:798-860 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors