PDB 7NVT
ELECTRON MICROSCOPY0 chains47 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
3 domainsChain Oview chain
2 domainsChain Qview chain
1 domainChain Rview chain
2 domainsChain Uview chain
2 domainsChain Vview chain
2 domainsChain Wview chain
2 domainsChain Xview chain
3 domainsAll Domains (47)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e7nvtA1 | A:11-155,A:182-350 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e7nvtA2 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e7nvtA3 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 4 | A | e7nvtA4 | A:1165-1297 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 5 | A | e7nvtA5 | A:351-388,A:450-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e7nvtA6 | A:1083-1135,A:1361-1487 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 7 | A | e7nvtA7 | A:1136-1164,A:1298-1360 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 8 | A | e7nvtA8 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 9 | A | e7nvtA9 | A:389-449 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 10 | B | e7nvtB1 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | B | e7nvtB2 | B:619-768 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 12 | B | e7nvtB3 | B:201-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 13 | B | e7nvtB4 | B:769-805,B:930-1053 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e7nvtB5 | B:1054-1174 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | B | e7nvtB6 | B:529-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 16 | B | e7nvtB7 | B:15-67,B:87-200,B:392-528 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 17 | C | e7nvtC1 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | C | e7nvtC2 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | D | e7nvtD1 | D:14-141 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e7nvtE1 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e7nvtE2 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e7nvtF1 | F:49-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e7nvtG1 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 24 | G | e7nvtG2 | G:78-171 | S1 | 2 → 2.1 → 2.1.1 |
| 25 | H | e7nvtH1 | H:2-149 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e7nvtI1 | I:12-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | I | e7nvtI2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | J | e7nvtJ1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e7nvtK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e7nvtL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 31 | M | e7nvtM1 | M:106-207 | TFIIB | 101 → 101.1 → 101.1.10 |
| 32 | M | e7nvtM2 | M:14-54 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 33 | M | e7nvtM3 | M:208-316 | TFIIB | 101 → 101.1 → 101.1.10 |
| 34 | O | e7nvtO1 | O:256-337 | TBP | 331 → 331.1 → 331.1.1 |
| 35 | O | e7nvtO2 | O:159-255 | TBP | 331 → 331.1 → 331.1.1 |
| 36 | Q | e7nvtQ1 | Q:5-54,Q:93-180 | TFIIF_alpha | 59 → 59.1 → 59.1.1 |
| 37 | R | e7nvtR1 | R:2-119 | TFIIF_beta_N | 59 → 59.1 → 59.1.1 |
| 38 | R | e7nvtR2 | R:175-238 | TFIIF_beta | 101 → 101.1 → 101.1.2 |
| 39 | U | e7nvtU1 | U:9-51,U:308-321 | TFIIA | 104 → 104.1 → 104.1.1 |
| 40 | U | e7nvtU2 | U:322-376 | TFIIA | 74 → 74.1 → 74.1.1 |
| 41 | V | e7nvtV1 | V:1-53 | TFIIA_gamma_N | 104 → 104.1 → 104.1.1 |
| 42 | V | e7nvtV2 | V:54-99 | TFIIA_gamma_C | 74 → 74.1 → 74.1.1 |
| 43 | W | e7nvtW1 | W:104-196 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 44 | W | e7nvtW2 | W:10-103 | TFIIE_alpha | 101 → 101.1 → 101.1.2 |
| 45 | X | e7nvtX1 | X:210-242 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 46 | X | e7nvtX2 | X:147-209 | TFA2_Winged_2 | 101 → 101.1 → 101.1.2 |
| 47 | X | e7nvtX3 | X:72-146 | TFIIE_beta | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors