PDB 7OPC
ELECTRON MICROSCOPY0 chains57 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
9 domainsChain bview chain
2 domainsChain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain Dview chain
1 domainChain eview chain
5 domainsChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
7 domainsChain Yview chain
1 domainChain Zview chain
2 domainsAll Domains (57)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e7opca1 | a:1-365 | WD40 | 5 → 5.1 → 5.1.4 |
| 2 | A | e7opcA1 | A:351-388,A:450-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e7opcA2 | A:389-449 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 4 | A | e7opcA3 | A:1136-1164,A:1298-1360 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 5 | A | e7opcA4 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 6 | A | e7opcA5 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 7 | A | e7opcA6 | A:1165-1297 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 8 | A | e7opcA7 | A:1083-1135,A:1361-1481 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 9 | A | e7opcA8 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 10 | A | e7opcA9 | A:11-155,A:182-350 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 11 | b | e7opcb1 | b:490-753 | SNF2-rel_dom | 2004 → 2004.1 → 2004.1.1 |
| 12 | b | e7opcb2 | b:754-1011,b:1383-1399 | SNF2-rel_dom,Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 13 | B | e7opcB1 | B:15-199,B:391-528 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 14 | B | e7opcB2 | B:768-805,B:930-1055 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | B | e7opcB3 | B:1054-1174 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 16 | B | e7opcB4 | B:619-767 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 17 | B | e7opcB5 | B:200-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 18 | B | e7opcB6 | B:529-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 19 | B | e7opcB7 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 20 | c | e7opcc1 | c:3-143 | UVSSA_N | 109 → 109.4 → 109.4.1 |
| 21 | C | e7opcC1 | C:2-42,C:179-270 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | C | e7opcC2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 23 | d | e7opcd1 | d:1-385 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 24 | d | e7opcd2 | d:685-1044 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 25 | d | e7opcd3 | d:1045-1140 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 26 | d | e7opcd4 | d:386-684 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 27 | D | e7opcD1 | D:14-141 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 28 | e | e7opce1 | e:49-402 | Cullin | 109 → 109.4 → 109.4.1 |
| 29 | e | e7opce2 | e:675-759 | Cullin_Nedd8 | 101 → 101.1 → 101.1.2 |
| 30 | e | e7opce3 | e:493-591 | Cullin_AB | 4001 → 4001.1 → 4001.1.1 |
| 31 | e | e7opce4 | e:403-492 | Cullin | 109 → 109.4 → 109.4.1 |
| 32 | e | e7opce5 | e:592-674 | PF26557 | 101 → 101.1 → 101.1.2 |
| 33 | E | e7opcE1 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 34 | E | e7opcE2 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 35 | f | e7opcf1 | f:19-106 | zf-rbx1 | 376 → 376.1 → 376.1.1 |
| 36 | F | e7opcF1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 37 | G | e7opcG1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 38 | G | e7opcG2 | G:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 39 | H | e7opcH1 | H:2-149 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 40 | I | e7opcI1 | I:62-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 41 | I | e7opcI2 | I:9-61 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 42 | J | e7opcJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 43 | K | e7opcK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 44 | L | e7opcL1 | L:13-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 45 | M | e7opcM1 | M:757-944 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 46 | M | e7opcM2 | M:1043-1144 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 47 | M | e7opcM3 | M:284-332,M:355-404 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 48 | M | e7opcM4 | M:945-1042 | HHH_7 | 102 → 102.1 → 102.1.1 |
| 49 | M | e7opcM5 | M:405-475 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 50 | M | e7opcM6 | M:515-756 | Tex_central_region | 4342 → 4342.1 → 4342.1.1 |
| 51 | M | e7opcM7 | M:1145-1175,M:1226-1287 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
| 52 | S | e7opcS1 | S:1-246,S:391-393 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 53 | S | e7opcS2 | S:306-390,S:394-409 | TPR_2,TPR_8 | 109 → 109.4 → 109.4.1 |
| 54 | S | e7opcS3 | S:502-763 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 55 | Y | e7opcY1 | Y:5-304 | WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.5 |
| 56 | Z | e7opcZ1 | Z:1-111 | CDC73_N | 101 → 101.46 → 101.46.1 |
| 57 | Z | e7opcZ2 | Z:358-523 | CDC73_C | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors