PDB 7VPZ
ELECTRON MICROSCOPY0 chains25 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
8 domainsChain Eview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainAll Domains (25)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e7vpzA1 | A:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e7vpzA2 | A:2-47,A:170-227 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e7vpzB1 | B:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e7vpzB2 | B:1-47,B:170-233 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | C | e7vpzC1 | C:16-169,C:363-488 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 6 | C | e7vpzC2 | C:489-624 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 7 | C | e7vpzC3 | C:1021-1131 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e7vpzC4 | C:625-695 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 9 | C | e7vpzC5 | C:734-865 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | C | e7vpzC6 | C:170-362 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | C | e7vpzC7 | C:696-733,C:866-1020 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 12 | D | e7vpzD1 | D:171-231,D:591-599,D:619-630,D:636-639 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | D | e7vpzD2 | D:232-258 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | D | e7vpzD3 | D:309-415 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 15 | D | e7vpzD4 | D:416-578 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 16 | D | e7vpzD5 | D:579-590,D:600-618,D:631-635,D:640-729 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 17 | D | e7vpzD6 | D:730-882 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 18 | D | e7vpzD7 | D:883-975 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 19 | D | e7vpzD8 | D:969-1259 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 20 | E | e7vpzE1 | E:9-85 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 21 | F | e7vpzF1 | F:210-346 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 22 | F | e7vpzF2 | F:375-377,F:404-510 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 23 | F | e7vpzF3 | F:347-403 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 24 | M | e7vpzM1 | M:6-136 | FUR | 101 → 101.1 → 101.1.2 |
| 25 | N | e7vpzN1 | N:6-136 | FUR | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors