PDB 7XSZ
ELECTRON MICROSCOPY0 chains55 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
9 domainsChain bview chain
1 domainChain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain mview chain
8 domainsChain Mview chain
1 domainChain nview chain
1 domainChain qview chain
2 domainsChain Vview chain
1 domainChain Wview chain
3 domainsChain xview chain
1 domainAll Domains (55)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e7xsza1 | a:43-134 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e7xszA1 | A:521-663 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 3 | A | e7xszA2 | A:873-1061 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 4 | A | e7xszA3 | A:338-375,A:437-520 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e7xszA4 | A:1134-1244 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 6 | A | e7xszA5 | A:664-872 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e7xszA6 | A:1062-1104,A:1304-1455 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 8 | A | e7xszA7 | A:376-436 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 9 | A | e7xszA8 | A:1105-1133,A:1245-1303 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 10 | A | e7xszA9 | A:2-337 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 11 | b | e7xszb1 | b:20-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 12 | B | e7xszB1 | B:210-397 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 13 | B | e7xszB2 | B:1098-1222 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 14 | B | e7xszB3 | B:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 15 | B | e7xszB4 | B:535-623 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 16 | B | e7xszB5 | B:814-850,B:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 17 | B | e7xszB6 | B:624-655,B:675-813 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 18 | B | e7xszB7 | B:9-57,B:77-121,B:155-209,B:398-534 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 19 | c | e7xszc1 | c:16-118 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 20 | C | e7xszC1 | C:41-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 21 | C | e7xszC2 | C:4-40,C:173-266 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | d | e7xszd1 | d:28-122 | Histone | 148 → 148.1 → 148.1.1 |
| 23 | D | e7xszD1 | D:3-184 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 24 | e | e7xsze1 | e:39-135 | Histone | 148 → 148.1 → 148.1.1 |
| 25 | E | e7xszE1 | E:143-214 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 26 | E | e7xszE2 | E:2-142 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 27 | f | e7xszf1 | f:25-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 28 | F | e7xszF1 | F:71-154 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 29 | g | e7xszg1 | g:14-111 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 30 | G | e7xszG1 | G:69-171 | S1 | 2 → 2.1 → 2.1.1 |
| 31 | G | e7xszG2 | G:1-68 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 32 | h | e7xszh1 | h:32-121 | Histone | 148 → 148.1 → 148.1.1 |
| 33 | H | e7xszH1 | H:3-145 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 34 | I | e7xszI1 | I:3-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 35 | I | e7xszI2 | I:50-113 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 36 | J | e7xszJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 37 | K | e7xszK1 | K:1-113 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 38 | L | e7xszL1 | L:28-72 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 39 | m | e7xszm1 | m:387-485,m:527-544,m:606-624,m:819-820,m:870-871,m:1088-1093 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 40 | m | e7xszm2 | m:545-597 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 41 | m | e7xszm3 | m:598-605,m:625-818,m:821-849,m:853-865 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 42 | m | e7xszm4 | m:850-852,m:866-869,m:872-1033 | HHH_7, YqgF | 2484 → 2484.1 → 2484.1.1 |
| 43 | m | e7xszm5 | m:1034-1087,m:1094-1132 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 44 | m | e7xszm6 | m:1133-1238 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
| 45 | m | e7xszm7 | m:1287-1377 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 46 | m | e7xszm8 | m:1378-1470 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 47 | M | e7xszM1 | M:15-78 | Elf1 | 375 → 375.1 → 375.1.1 |
| 48 | n | e7xszn1 | n:152-290 | Med26 | 611 → 611.3 → 611.3.1 |
| 49 | q | e7xszq1 | q:1-49 | 331.4.1.0 | 331 → 331.4 → 331.4.1 |
| 50 | q | e7xszq2 | q:50-912 | TPR_16 | 109 → 109.4 → 109.4.1 |
| 51 | V | e7xszV1 | V:8-113 | Spt4 | 375 → 375.1 → 375.1.1 |
| 52 | W | e7xszW1 | W:322-453 | KOW, KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 53 | W | e7xszW2 | W:216-316 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 54 | W | e7xszW3 | W:752-812 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
| 55 | x | e7xszx1 | x:236-394 | CDC73_C | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors