ECODEvolutionary Classification of Protein Domains

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PDB 7YMX

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e7ymxA1(A:19-352)e7ymxA2(A:353-591)e7ymxA3(A:770-1223)e7ymxA4(A:591-769)

Chain Bview chain

4 domains

e7ymxB1(B:353-591)e7ymxB2(B:770-1223)e7ymxB3(B:19-352)e7ymxB4(B:591-769)

Chain Cview chain

4 domains

e7ymxC1(C:591-769)e7ymxC2(C:19-352)e7ymxC3(C:770-1223)e7ymxC4(C:353-591)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7ymxA1	A:19-352	bCoV_S1_N	10 → 10.1 → 10.1.1
2	A	e7ymxA2	A:353-591	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
3	A	e7ymxA3	A:770-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
4	A	e7ymxA4	A:591-769	1043.1.1.0	1043 → 1043.1 → 1043.1.1
5	B	e7ymxB1	B:353-591	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
6	B	e7ymxB2	B:770-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
7	B	e7ymxB3	B:19-352	bCoV_S1_N	10 → 10.1 → 10.1.1
8	B	e7ymxB4	B:591-769	1043.1.1.0	1043 → 1043.1 → 1043.1.1
9	C	e7ymxC1	C:591-769	1043.1.1.0	1043 → 1043.1 → 1043.1.1
10	C	e7ymxC2	C:19-352	bCoV_S1_N	10 → 10.1 → 10.1.1
11	C	e7ymxC3	C:770-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
12	C	e7ymxC4	C:353-591	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors