PDB 8A3Y
0 chains57 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
10 domainse8a3yA1(A:1-345,A:569-570,A:618-618,A:668-672)e8a3yA2(A:346-389,A:451-536)e8a3yA3(A:390-450)e8a3yA4(A:537-568,A:571-617,A:619-667,A:673-686)e8a3yA5(A:687-895,A:897-898)e8a3yA6(A:896-896,A:899-927)e8a3yA7(A:1056-1088)e8a3yA8(A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475)e8a3yA9(A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366)e8a3yA10(A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305)
Chain bview chain
1 domainChain Bview chain
7 domainsChain cview chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
8 domainsChain Rview chain
1 domainChain Wview chain
1 domainChain Xview chain
2 domainsChain Yview chain
1 domainAll Domains (57)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e8a3ya1 | a:39-136 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e8a3yA1 | A:1-345,A:569-570,A:618-618,A:668-672 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e8a3yA2 | A:346-389,A:451-536 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8a3yA3 | A:390-450 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e8a3yA4 | A:537-568,A:571-617,A:619-667,A:673-686 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e8a3yA5 | A:687-895,A:897-898 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e8a3yA6 | A:896-896,A:899-927 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e8a3yA7 | A:1056-1088 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 9 | A | e8a3yA8 | A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 10 | A | e8a3yA9 | A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 11 | A | e8a3yA10 | A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 12 | b | e8a3yb1 | b:24-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 13 | B | e8a3yB1 | B:696-845 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 14 | B | e8a3yB2 | B:606-695 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e8a3yB3 | B:883-1006 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 16 | B | e8a3yB4 | B:1131-1251 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | B | e8a3yB5 | B:278-468 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 18 | B | e8a3yB6 | B:846-882,B:1007-1130 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 19 | B | e8a3yB7 | B:93-144,B:164-277,B:469-605 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 20 | c | e8a3yc1 | c:1-103 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 21 | C | e8a3yC01 | C:1-44,C:123-126,C:181-265 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | C | e8a3yC02 | C:45-122,C:127-180 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 23 | d | e8a3yd1 | d:1-95 | Histone | 148 → 148.1 → 148.1.1 |
| 24 | D | e8a3yD1 | D:14-142 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 25 | e | e8a3ye1 | e:39-136 | Histone | 148 → 148.1 → 148.1.1 |
| 26 | E | e8a3yE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 27 | E | e8a3yE2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 28 | f | e8a3yf1 | f:24-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 29 | F | e8a3yF1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 30 | G | e8a3yG1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 31 | G | e8a3yG2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 32 | H | e8a3yH1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 33 | I | e8a3yI1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 34 | I | e8a3yI2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 35 | J | e8a3yJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 36 | K | e8a3yK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 37 | L | e8a3yL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 38 | M | e8a3yM01 | M:376-545,M:602-620,M:720,M:833-834 | 101.26.1.0 | 101 → 101.26 → 101.26.1 |
| 39 | M | e8a3yM02 | M:546-593 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 40 | M | e8a3yM03 | M:594-601,M:621-719,M:721-832,M:835-871,M:873-874 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 41 | M | e8a3yM04 | M:872,M:875-1037 | HHH_7, YqgF | 2484 → 2484.1 → 2484.1.1 |
| 42 | M | e8a3yM05 | M:1038-1128 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 43 | M | e8a3yM06 | M:1129-1332 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
| 44 | M | e8a3yM07 | M:1333-1429 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 45 | M | e8a3yM08 | M:1430-1519 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 46 | R | e8a3yR01 | R:353-497 | Plus-3 | 4 → 4.18 → 4.18.1 |
| 47 | W | e8a3yW1 | W:5-304 | WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 48 | X | e8a3yX1 | X:1-111 | CDC73_N | 101 → 101.46 → 101.46.1 |
| 49 | X | e8a3yX2 | X:358-523 | CDC73_C | 2004 → 2004.1 → 2004.1.1 |
| 50 | Y | e8a3yY1 | Y:6-121 | Spt4 | 375 → 375.1 → 375.1.1 |
| 51 | Z | e8a3yZ1 | Z:270-396 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 52 | Z | e8a3yZ2 | Z:176-269 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 53 | Z | e8a3yZ3 | Z:471-526 | KOW | 4 → 4.1 → 4.1.1 |
| 54 | Z | e8a3yZ4 | Z:416-470 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 55 | Z | e8a3yZ5 | Z:581-646 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 56 | Z | e8a3yZ6 | Z:703-754 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
| 57 | Z | e8a3yZ7 | Z:527-580 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors