PDB 8AGZ
ELECTRON MICROSCOPY0 chains54 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
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1 domainChain Aview chain
1 domainChain bview chain
1 domainChain Bview chain
1 domainChain cview chain
1 domainChain Cview chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
2 domainsChain gview chain
1 domainChain Gview chain
1 domainChain Hview chain
1 domainChain Iview chain
1 domainChain jview chain
2 domainsChain Jview chain
1 domainChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
2 domainsChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain Pview chain
1 domainChain qview chain
2 domainsChain Qview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainChain sview chain
1 domainChain Sview chain
1 domainChain tview chain
1 domainChain Tview chain
1 domainChain uview chain
1 domainChain Uview chain
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2 domainsChain Vview chain
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1 domainChain Xview chain
1 domainChain Yview chain
1 domainChain zview chain
2 domainsChain Zview chain
1 domainAll Domains (54)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e8agz01 | 0:3-107,0:184-199 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 2 | A | e8agzA1 | A:2-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 3 | b | e8agzb1 | b:2-104 | Ribosomal_L44 | 375 → 375.1 → 375.1.1 |
| 4 | B | e8agzB1 | B:3-199 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 5 | c | e8agzc1 | c:2-92 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 6 | C | e8agzC1 | C:2-184 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 7 | d | e8agzd1 | d:4-25 | Ribosomal_L41 | 6069 → 6069.1 → 6069.1.1 |
| 8 | D | e8agzD1 | D:2-186 | Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 9 | E | e8agzE1 | E:57-157 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 10 | E | e8agzE2 | E:2-56 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 11 | F | e8agzF1 | F:70-172 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 12 | F | e8agzF2 | F:2-69 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 13 | g | e8agzg1 | g:1-225 | eIF-6 | 232 → 232.1 → 232.1.1 |
| 14 | G | e8agzG1 | G:2-160 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 15 | H | e8agzH1 | H:9-108 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
| 16 | I | e8agzI1 | I:2-137 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 17 | j | e8agzj1 | j:99-247 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 18 | j | e8agzj2 | j:2-98 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 19 | J | e8agzJ1 | J:1-63 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 20 | k | e8agzk1 | k:2-387 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 21 | K | e8agzK1 | K:22-142 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 22 | l | e8agzl1 | l:2-269 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 23 | l | e8agzl2 | l:270-362 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 24 | L | e8agzL1 | L:2-126 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 25 | m | e8agzm1 | m:4-297 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 26 | M | e8agzM1 | M:2-136 | Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
| 27 | n | e8agzn1 | n:2-176 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 28 | N | e8agzN1 | N:2-149 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 29 | o | e8agzo1 | o:23-244 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 30 | O | e8agzO1 | O:2-59 | Ribosomal_L29e | 3212 → 3212.1 → 3212.1.1 |
| 31 | p | e8agzp1 | p:24-256 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 32 | P | e8agzP1 | P:9-104 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 33 | q | e8agzq1 | q:86-191 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 34 | q | e8agzq2 | q:1-85 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 35 | Q | e8agzQ1 | Q:4-112 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 36 | r | e8agzr1 | r:2-219 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 37 | R | e8agzR1 | R:2-128 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 38 | s | e8agzs1 | s:6-174 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 39 | S | e8agzS1 | S:2-107 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 40 | t | e8agzt1 | t:2-194 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 41 | T | e8agzT1 | T:2-113 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 42 | u | e8agzu1 | u:3-138 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 43 | U | e8agzU1 | U:2-120 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 44 | v | e8agzv1 | v:16-84 | IF5A-like_N | 4 → 4.1 → 4.1.1 |
| 45 | v | e8agzv2 | v:85-157 | eIF-5a | 2 → 2.1 → 2.1.1 |
| 46 | V | e8agzV1 | V:24-100 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 47 | w | e8agzw1 | w:2-56,w:153-217 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 48 | w | e8agzw2 | w:57-152 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 49 | W | e8agzW1 | W:2-82 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 50 | X | e8agzX1 | X:2-78 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 51 | Y | e8agzY1 | Y:2-51 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 52 | z | e8agzz1 | z:74-163 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 53 | z | e8agzz2 | z:10-73 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 54 | Z | e8agzZ1 | Z:77-128 | Ribosomal_L40e | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors