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PDB 8B3D

ELECTRON MICROSCOPY0 chains38 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (38)

#ChainDomain IDRangeFamilyClassification
1ae8b3da1a:1-365WD405 → 5.1 → 5.1.4
2Ae8b3dA1A:351-388,A:450-533RNA_pol_Rpb1_21 → 1.1 → 1.1.2
3Ae8b3dA2A:1083-1135,A:1361-1481RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
4Ae8b3dA3A:895-1082RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
5Ae8b3dA4A:1136-1164,A:1298-1360RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
6Ae8b3dA5A:686-894RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
7Ae8b3dA6A:389-449RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
8Ae8b3dA7A:11-155,A:182-350RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
9Ae8b3dA8A:1165-1297RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
10Ae8b3dA9A:534-685RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
11be8b3db1b:490-754SNF2-rel_dom2004 → 2004.1 → 2004.1.1
12be8b3db2b:755-1025,b:1383-1399SNF2-rel_dom,Helicase_C2004 → 2004.1 → 2004.1.1
13Be8b3dB1B:201-391RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
14Be8b3dB2B:619-768RNA_pol_Rpb2_6,RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
15Be8b3dB3B:1054-1174RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
16Be8b3dB4B:806-929RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
17Be8b3dB5B:769-805,B:930-1053RNA_pol_Rpb2_61 → 1.1 → 1.1.2
18Be8b3dB6B:15-67,B:87-200,B:392-528RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
19Be8b3dB7B:529-618RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
20ce8b3dc1c:3-143UVSSA_N109 → 109.4 → 109.4.1
21Ce8b3dC1C:2-42,C:179-270RNA_pol_L305 → 305.1 → 305.1.1
22Ce8b3dC2C:43-178RNA_pol_A_bac240 → 240.2 → 240.2.1
23de8b3dd1d:1-355MMS1_N5 → 5.1 → 5.1.4
24de8b3dd2d:1045-1140CPSF_A101 → 101.1 → 101.1.1
25de8b3dd3d:356-392,d:709-1044CPSF_A5 → 5.1 → 5.1.4
26De8b3dD1D:14-141RNA_pol_Rpb4102 → 102.1 → 102.1.1
27Ee8b3dE1E:2-138RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
28Ee8b3dE2E:139-210RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
29Fe8b3dF1F:46-127RNA_pol_Rpb6152 → 152.1 → 152.1.1
30Ge8b3dG1G:78-171S12 → 2.1 → 2.1.1
31Ge8b3dG2G:1-77SHS2_Rpb7-N872 → 872.1 → 872.1.1
32He8b3dH1H:2-149RNA_pol_Rpb82 → 2.1 → 2.1.1
33Ie8b3dI1I:9-59RNA_POL_M_15KD375 → 375.1 → 375.1.1
34Ie8b3dI2I:60-125TFIIS_C375 → 375.1 → 375.1.1
35Je8b3dJ1J:1-67RNA_pol_N101 → 101.4 → 101.4.1
36Ke8b3dK1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
37Le8b3dL1L:13-58DNA_RNApol_7kD375 → 375.1 → 375.1.1
38Me8b3dM1M:20-83Elf1375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors