ECODEvolutionary Classification of Protein Domains

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PDB 8BB2

X-RAY DIFFRACTION2.05 Å0 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Bview chain

1 domain

e8bb2B1(B:32-334)

Chain Jview chain

1 domain

e8bb2J1(J:1-104)

Chain Kview chain

1 domain

e8bb2K1(K:17-112)

Chain Lview chain

2 domains

e8bb2L1(L:155-207)e8bb2L2(L:58-154)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	B	e8bb2B1	B:32-334	WD40, eIF2A, Beta-prop_WDR5	5 → 5.1 → 5.1.4
2	J	e8bb2J1	J:1-104	ubiquitin	221 → 221.1 → 221.1.1
3	K	e8bb2K1	K:17-112	Skp1_POZ	226 → 226.1 → 226.1.1
4	L	e8bb2L1	L:155-207	VHL_C	4215 → 4215.1 → 4215.1.1
5	L	e8bb2L2	L:58-154	VHL	11 → 11.1 → 11.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors