ECODEvolutionary Classification of Protein Domains

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PDB 8BB4

X-RAY DIFFRACTION2.80 Å0 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Iview chain

1 domain

e8bb4I1(I:1-104)

Chain Oview chain

1 domain

e8bb4O1(O:17-112)

Chain Pview chain

2 domains

e8bb4P1(P:154-208)e8bb4P2(P:62-153)

Chain Qview chain

1 domain

e8bb4Q1(Q:33-334)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	I	e8bb4I1	I:1-104	ubiquitin	221 → 221.1 → 221.1.1
2	O	e8bb4O1	O:17-112	Skp1_POZ	226 → 226.1 → 226.1.1
3	P	e8bb4P1	P:154-208	VHL_C	4215 → 4215.1 → 4215.1.1
4	P	e8bb4P2	P:62-153	VHL	11 → 11.1 → 11.1.4
5	Q	e8bb4Q1	Q:33-334	WD40, eIF2A, Beta-prop_WDR5	5 → 5.1 → 5.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors