ECODEvolutionary Classification of Protein Domains

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PDB 8BB5

X-RAY DIFFRACTION2.20 Å0 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

1 domain

e8bb5A1(A:1-104)

Chain Bview chain

1 domain

e8bb5B1(B:16-112)

Chain Cview chain

2 domains

e8bb5C1(C:155-210)e8bb5C2(C:57-154)

Chain Dview chain

1 domain

e8bb5D1(D:27-333)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8bb5A1	A:1-104	ubiquitin	221 → 221.1 → 221.1.1
2	B	e8bb5B1	B:16-112	Skp1_POZ	226 → 226.1 → 226.1.1
3	C	e8bb5C1	C:155-210	VHL_C	4215 → 4215.1 → 4215.1.1
4	C	e8bb5C2	C:57-154	VHL	11 → 11.1 → 11.1.4
5	D	e8bb5D1	D:27-333	WD40, eIF2A, Beta-prop_WDR5	5 → 5.1 → 5.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors