PDB 8BDN
X-RAY DIFFRACTION2.76 Å0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
1 domainChain Bview chain
1 domainChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
1 domainChain Fview chain
2 domainsChain Gview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
2 domainsAll Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8bdnA1 | A:1-104 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 2 | B | e8bdnB1 | B:16-112 | Skp1_POZ | 226 → 226.1 → 226.1.1 |
| 3 | C | e8bdnC1 | C:155-206 | VHL_C | 4215 → 4215.1 → 4215.1.1 |
| 4 | C | e8bdnC2 | C:62-154 | VHL | 11 → 11.1 → 11.1.4 |
| 5 | D | e8bdnD1 | D:1-104 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 6 | E | e8bdnE1 | E:16-112 | Skp1_POZ | 226 → 226.1 → 226.1.1 |
| 7 | F | e8bdnF1 | F:155-206 | VHL_C | 4215 → 4215.1 → 4215.1.1 |
| 8 | F | e8bdnF2 | F:62-154 | VHL | 11 → 11.1 → 11.1.4 |
| 9 | G | e8bdnG1 | G:1-104 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 10 | H | e8bdnH1 | H:16-112 | Skp1_POZ | 226 → 226.1 → 226.1.1 |
| 11 | I | e8bdnI1 | I:62-153 | VHL | 11 → 11.1 → 11.1.4 |
| 12 | I | e8bdnI2 | I:154-208 | VHL_C | 4215 → 4215.1 → 4215.1.1 |
| 13 | J | e8bdnJ1 | J:1-104 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 14 | K | e8bdnK1 | K:16-112 | Skp1_POZ | 226 → 226.1 → 226.1.1 |
| 15 | L | e8bdnL1 | L:62-154 | VHL | 11 → 11.1 → 11.1.4 |
| 16 | L | e8bdnL2 | L:155-204 | VHL_C | 4215 → 4215.1 → 4215.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors