PDB 8BVW
ELECTRON MICROSCOPY0 chains73 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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3 domainsAll Domains (73)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e8bvw001 | 0:283-325,0:333-335,0:383-385,0:412-421,0:427-431 | 3696.1.1.0 | 3696 → 3696.1 → 3696.1.1 |
| 2 | 0 | e8bvw002 | 0:326-332,0:336-382,0:386-411,0:422-426,0:432-470 | ResIII | 2004 → 2004.1 → 2004.1.1 |
| 3 | 0 | e8bvw003 | 0:510-730 | Helicase_C, ERCC3_RAD25_C | 2004 → 2004.1 → 2004.1.1 |
| 4 | 1 | e8bvw11 | 1:1-243 | DEAD_2 | 2004 → 2004.1 → 2004.1.1 |
| 5 | 1 | e8bvw12 | 1:447-728 | Helicase_C_2 | 2004 → 2004.1 → 2004.1.1 |
| 6 | 1 | e8bvw13 | 1:244-446 | HBB | 3636 → 3636.1 → 3636.1.1 |
| 7 | 3 | e8bvw31 | 3:388-459 | Tfb2_C | 4340 → 4340.1 → 4340.1.1 |
| 8 | 4 | e8bvw41 | 4:239-316 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 9 | 4 | e8bvw42 | 4:7-24,4:53-238 | Ssl1 | 2006 → 2006.1 → 2006.1.6 |
| 10 | 4 | e8bvw43 | 4:317-387 | C1_4 | 376 → 376.1 → 376.1.2 |
| 11 | 5 | e8bvw51 | 5:265-292 | Tfb4 | 375 → 375.1 → 375.1.1 |
| 12 | 5 | e8bvw52 | 5:8-72,5:95-264 | Tfb4 | 2006 → 2006.1 → 2006.1.6 |
| 13 | 6 | e8bvw61 | 6:3-71 | Tfb5 | 4340 → 4340.1 → 4340.1.1 |
| 14 | 7 | e8bvw71 | 7:1-69 | zf-C3HC4_5 | 376 → 376.1 → 376.1.1 |
| 15 | 7 | e8bvw72 | 7:70-149 | MAT1 | 386 → 386.1 → 386.1.1 |
| 16 | 8 | e8bvw81 | 8:13-311 | Pkinase | 206 → 206.1 → 206.1.1 |
| 17 | 9 | e8bvw91 | 9:162-288 | Cyclin_C_2 | 101 → 101.1 → 101.1.10 |
| 18 | 9 | e8bvw92 | 9:2-161 | Cyclin_N | 101 → 101.1 → 101.1.10 |
| 19 | a | e8bvwa1 | a:39-135 | Histone | 148 → 148.1 → 148.1.1 |
| 20 | A | e8bvwA1 | A:351-388,A:450-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 21 | A | e8bvwA2 | A:1136-1164,A:1298-1360 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 22 | A | e8bvwA3 | A:389-449 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 23 | A | e8bvwA4 | A:11-155,A:182-350 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 24 | A | e8bvwA5 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 25 | A | e8bvwA6 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 26 | A | e8bvwA7 | A:1165-1297 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 27 | A | e8bvwA8 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 28 | A | e8bvwA9 | A:1083-1135,A:1361-1487 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 29 | b | e8bvwb1 | b:22-103 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 30 | B | e8bvwB1 | B:201-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 31 | B | e8bvwB2 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 32 | B | e8bvwB3 | B:529-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 33 | B | e8bvwB4 | B:769-805,B:930-1053 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 34 | B | e8bvwB5 | B:619-768 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 35 | B | e8bvwB6 | B:15-67,B:87-200,B:392-528 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 36 | B | e8bvwB7 | B:1054-1174 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 37 | c | e8bvwc1 | c:12-120 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 38 | C | e8bvwC1 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 39 | C | e8bvwC2 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 40 | d | e8bvwd1 | d:30-126 | Histone | 148 → 148.1 → 148.1.1 |
| 41 | D | e8bvwD1 | D:14-141 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 42 | e | e8bvwe1 | e:38-135 | Histone | 148 → 148.1 → 148.1.1 |
| 43 | E | e8bvwE1 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 44 | E | e8bvwE2 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 45 | f | e8bvwf1 | f:24-103 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 46 | F | e8bvwF1 | F:49-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 47 | g | e8bvwg1 | g:14-119 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 48 | G | e8bvwG1 | G:78-171 | S1 | 2 → 2.1 → 2.1.1 |
| 49 | G | e8bvwG2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 50 | h | e8bvwh1 | h:32-126 | Histone | 148 → 148.1 → 148.1.1 |
| 51 | H | e8bvwH1 | H:2-149 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 52 | I | e8bvwI1 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 53 | I | e8bvwI2 | I:12-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 54 | J | e8bvwJ1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 55 | K | e8bvwK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 56 | L | e8bvwL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 57 | M | e8bvwM1 | M:208-316 | TFIIB | 101 → 101.1 → 101.1.10 |
| 58 | M | e8bvwM2 | M:14-54 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 59 | M | e8bvwM3 | M:106-207 | TFIIB | 101 → 101.1 → 101.1.10 |
| 60 | O | e8bvwO1 | O:159-256 | TBP | 331 → 331.1 → 331.1.1 |
| 61 | O | e8bvwO2 | O:257-337 | TBP | 331 → 331.1 → 331.1.1 |
| 62 | Q | e8bvwQ1 | Q:5-54,Q:93-180 | TFIIF_alpha | 59 → 59.1 → 59.1.1 |
| 63 | R | e8bvwR1 | R:2-119 | TFIIF_beta_N | 59 → 59.1 → 59.1.1 |
| 64 | R | e8bvwR2 | R:175-238 | TFIIF_beta | 101 → 101.1 → 101.1.2 |
| 65 | U | e8bvwU1 | U:322-376 | TFIIA | 74 → 74.1 → 74.1.1 |
| 66 | U | e8bvwU2 | U:9-51,U:308-321 | TFIIA | 104 → 104.1 → 104.1.1 |
| 67 | V | e8bvwV1 | V:1-53 | TFIIA_gamma_N | 104 → 104.1 → 104.1.1 |
| 68 | V | e8bvwV2 | V:54-99 | TFIIA_gamma_C | 74 → 74.1 → 74.1.1 |
| 69 | W | e8bvwW1 | W:104-196,W:274-288 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 70 | W | e8bvwW2 | W:10-103 | TFIIE_alpha | 101 → 101.1 → 101.1.2 |
| 71 | X | e8bvwX1 | X:210-242 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 72 | X | e8bvwX2 | X:72-146 | TFIIE_beta | 101 → 101.1 → 101.1.2 |
| 73 | X | e8bvwX3 | X:147-209 | TFA2_Winged_2 | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors