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PDB 8BYQ

ELECTRON MICROSCOPY0 chains70 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (70)

#ChainDomain IDRangeFamilyClassification
10e8byq010:493-718Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
20e8byq020:244-492ResIII2004 → 2004.1 → 2004.1.1
31e8byq111:1-243DEAD_22004 → 2004.1 → 2004.1.1
41e8byq121:447-760Helicase_C_22004 → 2004.1 → 2004.1.1
51e8byq131:244-446HBB3636 → 3636.1 → 3636.1.1
63e8byq313:388-459Tfb2_C4340 → 4340.1 → 4340.1.1
74e8byq414:54-241Ssl12006 → 2006.1 → 2006.1.6
85e8byq515:265-292Tfb4375 → 375.1 → 375.1.1
95e8byq525:8-72,5:95-264Tfb42006 → 2006.1 → 2006.1.6
106e8byq616:2-67Tfb54340 → 4340.1 → 4340.1.1
117e8byq717:1-69zf-C3HC4_5376 → 376.1 → 376.1.1
127e8byq727:70-149MAT1386 → 386.1 → 386.1.1
138e8byq818:13-310Pkinase206 → 206.1 → 206.1.1
149e8byq919:162-288Cyclin_C_2101 → 101.1 → 101.1.10
159e8byq929:2-161Cyclin_N101 → 101.1 → 101.1.10
16ae8byqa1a:39-135Histone148 → 148.1 → 148.1.1
17Ae8byqA1A:1083-1135,A:1361-1487RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
18Ae8byqA2A:351-388,A:450-533RNA_pol_Rpb1_21 → 1.1 → 1.1.2
19Ae8byqA3A:389-449RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
20Ae8byqA4A:895-1082RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
21Ae8byqA5A:534-685RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
22Ae8byqA6A:1165-1297RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
23Ae8byqA7A:11-155,A:182-350RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
24Ae8byqA8A:1136-1164,A:1298-1360RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
25Ae8byqA9A:686-894RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
26be8byqb1b:22-103CENP-T_C148 → 148.1 → 148.1.1
27Be8byqB1B:15-67,B:87-200,B:392-528RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
28Be8byqB2B:1054-1174RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
29Be8byqB3B:619-768RNA_pol_Rpb2_6,RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
30Be8byqB4B:201-391RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
31Be8byqB5B:769-805,B:930-1053RNA_pol_Rpb2_61 → 1.1 → 1.1.2
32Be8byqB6B:529-618RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
33Be8byqB7B:806-929RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
34ce8byqc1c:12-120148.1.1.0148 → 148.1 → 148.1.1
35Ce8byqC1C:43-178RNA_pol_A_bac240 → 240.2 → 240.2.1
36Ce8byqC2C:2-42,C:179-271RNA_pol_L305 → 305.1 → 305.1.1
37de8byqd1d:30-126Histone148 → 148.1 → 148.1.1
38De8byqD1D:14-141RNA_pol_Rpb4102 → 102.1 → 102.1.1
39ee8byqe1e:38-135Histone148 → 148.1 → 148.1.1
40Ee8byqE1E:139-210RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
41Ee8byqE2E:2-138RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
42fe8byqf1f:22-103CENP-T_C148 → 148.1 → 148.1.1
43Fe8byqF1F:49-127RNA_pol_Rpb6152 → 152.1 → 152.1.1
44ge8byqg1g:14-119148.1.1.0148 → 148.1 → 148.1.1
45Ge8byqG1G:1-77SHS2_Rpb7-N872 → 872.1 → 872.1.1
46Ge8byqG2G:78-171S12 → 2.1 → 2.1.1
47he8byqh1h:32-126Histone148 → 148.1 → 148.1.1
48He8byqH1H:2-149RNA_pol_Rpb82 → 2.1 → 2.1.1
49Ie8byqI1I:12-59RNA_POL_M_15KD375 → 375.1 → 375.1.1
50Ie8byqI2I:60-125TFIIS_C375 → 375.1 → 375.1.1
51Je8byqJ1J:1-64RNA_pol_N101 → 101.4 → 101.4.1
52Ke8byqK1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
53Le8byqL1L:15-58DNA_RNApol_7kD375 → 375.1 → 375.1.1
54Me8byqM1M:14-54TF_Zn_Ribbon375 → 375.1 → 375.1.1
55Me8byqM2M:208-316TFIIB101 → 101.1 → 101.1.10
56Me8byqM3M:106-207TFIIB101 → 101.1 → 101.1.10
57Oe8byqO1O:159-256TBP331 → 331.1 → 331.1.1
58Oe8byqO2O:257-337TBP331 → 331.1 → 331.1.1
59Qe8byqQ1Q:5-54,Q:93-180TFIIF_alpha59 → 59.1 → 59.1.1
60Re8byqR1R:2-119TFIIF_beta_N59 → 59.1 → 59.1.1
61Re8byqR2R:175-238TFIIF_beta101 → 101.1 → 101.1.2
62Ue8byqU1U:322-376TFIIA74 → 74.1 → 74.1.1
63Ue8byqU2U:9-51,U:308-321TFIIA104 → 104.1 → 104.1.1
64Ve8byqV1V:54-99TFIIA_gamma_C74 → 74.1 → 74.1.1
65Ve8byqV2V:1-53TFIIA_gamma_N104 → 104.1 → 104.1.1
66We8byqW1W:104-196TF_Zn_Ribbon375 → 375.1 → 375.1.1
67We8byqW2W:10-103TFIIE_alpha101 → 101.1 → 101.1.2
68Xe8byqX1X:72-146TFIIE_beta101 → 101.1 → 101.1.2
69Xe8byqX2X:147-209TFA2_Winged_2101 → 101.1 → 101.1.2
70Xe8byqX3X:210-242101.1.2.0101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors