PDB 8BYQ
ELECTRON MICROSCOPY0 chains70 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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9 domainsChain bview chain
1 domainChain Bview chain
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1 domainChain Fview chain
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1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
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1 domainChain Kview chain
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3 domainsChain Oview chain
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3 domainsAll Domains (70)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e8byq01 | 0:493-718 | Helicase_C, ERCC3_RAD25_C | 2004 → 2004.1 → 2004.1.1 |
| 2 | 0 | e8byq02 | 0:244-492 | ResIII | 2004 → 2004.1 → 2004.1.1 |
| 3 | 1 | e8byq11 | 1:1-243 | DEAD_2 | 2004 → 2004.1 → 2004.1.1 |
| 4 | 1 | e8byq12 | 1:447-760 | Helicase_C_2 | 2004 → 2004.1 → 2004.1.1 |
| 5 | 1 | e8byq13 | 1:244-446 | HBB | 3636 → 3636.1 → 3636.1.1 |
| 6 | 3 | e8byq31 | 3:388-459 | Tfb2_C | 4340 → 4340.1 → 4340.1.1 |
| 7 | 4 | e8byq41 | 4:54-241 | Ssl1 | 2006 → 2006.1 → 2006.1.6 |
| 8 | 5 | e8byq51 | 5:265-292 | Tfb4 | 375 → 375.1 → 375.1.1 |
| 9 | 5 | e8byq52 | 5:8-72,5:95-264 | Tfb4 | 2006 → 2006.1 → 2006.1.6 |
| 10 | 6 | e8byq61 | 6:2-67 | Tfb5 | 4340 → 4340.1 → 4340.1.1 |
| 11 | 7 | e8byq71 | 7:1-69 | zf-C3HC4_5 | 376 → 376.1 → 376.1.1 |
| 12 | 7 | e8byq72 | 7:70-149 | MAT1 | 386 → 386.1 → 386.1.1 |
| 13 | 8 | e8byq81 | 8:13-310 | Pkinase | 206 → 206.1 → 206.1.1 |
| 14 | 9 | e8byq91 | 9:162-288 | Cyclin_C_2 | 101 → 101.1 → 101.1.10 |
| 15 | 9 | e8byq92 | 9:2-161 | Cyclin_N | 101 → 101.1 → 101.1.10 |
| 16 | a | e8byqa1 | a:39-135 | Histone | 148 → 148.1 → 148.1.1 |
| 17 | A | e8byqA1 | A:1083-1135,A:1361-1487 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 18 | A | e8byqA2 | A:351-388,A:450-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 19 | A | e8byqA3 | A:389-449 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 20 | A | e8byqA4 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 21 | A | e8byqA5 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 22 | A | e8byqA6 | A:1165-1297 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 23 | A | e8byqA7 | A:11-155,A:182-350 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 24 | A | e8byqA8 | A:1136-1164,A:1298-1360 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 25 | A | e8byqA9 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 26 | b | e8byqb1 | b:22-103 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 27 | B | e8byqB1 | B:15-67,B:87-200,B:392-528 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 28 | B | e8byqB2 | B:1054-1174 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 29 | B | e8byqB3 | B:619-768 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 30 | B | e8byqB4 | B:201-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 31 | B | e8byqB5 | B:769-805,B:930-1053 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 32 | B | e8byqB6 | B:529-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 33 | B | e8byqB7 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 34 | c | e8byqc1 | c:12-120 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 35 | C | e8byqC1 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 36 | C | e8byqC2 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 37 | d | e8byqd1 | d:30-126 | Histone | 148 → 148.1 → 148.1.1 |
| 38 | D | e8byqD1 | D:14-141 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 39 | e | e8byqe1 | e:38-135 | Histone | 148 → 148.1 → 148.1.1 |
| 40 | E | e8byqE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 41 | E | e8byqE2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 42 | f | e8byqf1 | f:22-103 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 43 | F | e8byqF1 | F:49-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 44 | g | e8byqg1 | g:14-119 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 45 | G | e8byqG1 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 46 | G | e8byqG2 | G:78-171 | S1 | 2 → 2.1 → 2.1.1 |
| 47 | h | e8byqh1 | h:32-126 | Histone | 148 → 148.1 → 148.1.1 |
| 48 | H | e8byqH1 | H:2-149 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 49 | I | e8byqI1 | I:12-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 50 | I | e8byqI2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 51 | J | e8byqJ1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 52 | K | e8byqK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 53 | L | e8byqL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 54 | M | e8byqM1 | M:14-54 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 55 | M | e8byqM2 | M:208-316 | TFIIB | 101 → 101.1 → 101.1.10 |
| 56 | M | e8byqM3 | M:106-207 | TFIIB | 101 → 101.1 → 101.1.10 |
| 57 | O | e8byqO1 | O:159-256 | TBP | 331 → 331.1 → 331.1.1 |
| 58 | O | e8byqO2 | O:257-337 | TBP | 331 → 331.1 → 331.1.1 |
| 59 | Q | e8byqQ1 | Q:5-54,Q:93-180 | TFIIF_alpha | 59 → 59.1 → 59.1.1 |
| 60 | R | e8byqR1 | R:2-119 | TFIIF_beta_N | 59 → 59.1 → 59.1.1 |
| 61 | R | e8byqR2 | R:175-238 | TFIIF_beta | 101 → 101.1 → 101.1.2 |
| 62 | U | e8byqU1 | U:322-376 | TFIIA | 74 → 74.1 → 74.1.1 |
| 63 | U | e8byqU2 | U:9-51,U:308-321 | TFIIA | 104 → 104.1 → 104.1.1 |
| 64 | V | e8byqV1 | V:54-99 | TFIIA_gamma_C | 74 → 74.1 → 74.1.1 |
| 65 | V | e8byqV2 | V:1-53 | TFIIA_gamma_N | 104 → 104.1 → 104.1.1 |
| 66 | W | e8byqW1 | W:104-196 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 67 | W | e8byqW2 | W:10-103 | TFIIE_alpha | 101 → 101.1 → 101.1.2 |
| 68 | X | e8byqX1 | X:72-146 | TFIIE_beta | 101 → 101.1 → 101.1.2 |
| 69 | X | e8byqX2 | X:147-209 | TFA2_Winged_2 | 101 → 101.1 → 101.1.2 |
| 70 | X | e8byqX3 | X:210-242 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors