PDB 8C00
ELECTRON MICROSCOPY0 chains36 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain bview chain
2 domainsChain Bview chain
1 domainChain cview chain
1 domainChain dview chain
1 domainChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Hview chain
1 domainChain Iview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain pview chain
2 domainsChain Qview chain
2 domainsChain rview chain
2 domainsChain Sview chain
3 domainsChain tview chain
4 domainsChain Tview chain
1 domainChain Uview chain
2 domainsChain Vview chain
1 domainChain Wview chain
1 domainChain Xview chain
1 domainChain Yview chain
2 domainsChain Zview chain
1 domainAll Domains (36)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | b | e8c00b1 | b:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 2 | b | e8c00b2 | b:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 3 | B | e8c00B1 | B:20-225 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 4 | c | e8c00c1 | c:2-145 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 5 | d | e8c00d1 | d:3-132 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 6 | e | e8c00e1 | e:213-394,e:414-427 | Bystin | 109 → 109.4 → 109.4.1 |
| 7 | E | e8c00E1 | E:14-129 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 8 | f | e8c00f1 | f:2-82 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 9 | F | e8c00F1 | F:3-127 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 10 | g | e8c00g1 | g:25-60 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 11 | H | e8c00H1 | H:10-66,H:90-131 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 12 | I | e8c00I1 | I:3-143 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 13 | K | e8c00K1 | K:36-104 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
| 14 | L | e8c00L1 | L:6-65 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 15 | p | e8c00p1 | p:93-177 | KH_8 | 327 → 327.11 → 327.11.2 |
| 16 | p | e8c00p2 | p:178-272 | KH_PNO1_2nd | 327 → 327.11 → 327.11.2 |
| 17 | Q | e8c00Q1 | Q:20-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 18 | Q | e8c00Q2 | Q:114-233 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 19 | r | e8c00r1 | r:1-93 | Rio2_N | 101 → 101.1 → 101.1.2 |
| 20 | r | e8c00r2 | r:94-288 | RIO1 | 206 → 206.1 → 206.1.1 |
| 21 | S | e8c00S1 | S:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 22 | S | e8c00S2 | S:2-116 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 23 | S | e8c00S3 | S:176-261 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 24 | t | e8c00t1 | t:67-250 | Tsr1_G-like | 2004 → 2004.1 → 2004.1.1 |
| 25 | t | e8c00t2 | t:251-309,t:549-586 | AARP2CN | 1 → 1.1 → 1.1.7 |
| 26 | t | e8c00t3 | t:698-786 | RIBIOP_C | 1 → 1.1 → 1.1.7 |
| 27 | t | e8c00t4 | t:587-697 | RIBIOP_C | 1 → 1.1 → 1.1.8 |
| 28 | T | e8c00T1 | T:1-226 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 29 | U | e8c00U1 | U:106-187 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 30 | U | e8c00U2 | U:4-105 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 31 | V | e8c00V1 | V:2-198 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 32 | W | e8c00W1 | W:2-186 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 33 | X | e8c00X1 | X:5-145 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 34 | Y | e8c00Y1 | Y:83-151 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 35 | Y | e8c00Y2 | Y:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 36 | Z | e8c00Z1 | Z:11-137 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors