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PDB 8C6J

ELECTRON MICROSCOPY0 chains78 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (78)

#ChainDomain IDRangeFamilyClassification
17e8c6j717:243-411Helicase_C2004 → 2004.1 → 2004.1.1
27e8c6j727:22-242DEAD2004 → 2004.1 → 2004.1.1
38e8c6j818:64-154RRM_1304 → 304.9 → 304.9.1
49e8c6j919:3-146Mago_nashi861 → 861.1 → 861.1.1
5ae8c6ja1a:13-115LSM4 → 4.1 → 4.1.1
6Ae8c6jA1A:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
7Ae8c6jA2A:2070-2314JAB,PROCT2492 → 2492.1 → 2492.1.1
8Ae8c6jA3A:25-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
9Ae8c6jA4A:1755-2019PRP8_domainIV2484 → 2484.1 → 2484.1.1
10Ae8c6jA5A:811-1182RRM_4304 → 304.48 → 304.48.1
11Ae8c6jA6A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
12be8c6jb1b:6-87LSM4 → 4.1 → 4.1.1
13Be8c6jB1B:403-682DEAD2004 → 2004.1 → 2004.1.1
14Be8c6jB2B:994-11254156.1.1.04156 → 4156.1 → 4156.1.1
15Be8c6jB3B:1723-1824SNRNP200_wHTH101 → 101.1 → 101.1.2
16Be8c6jB4B:1181-1311Sec6311 → 11.1 → 11.1.1
17Be8c6jB5B:683-886Helicase_C2004 → 2004.1 → 2004.1.1
18Be8c6jB6B:1126-1180102.5.1.0102 → 102.5 → 102.5.1
19Be8c6jB7B:887-993SNRNP200_wHTH101 → 101.1 → 101.1.2
20Be8c6jB8B:1312-1520DEAD2004 → 2004.1 → 2004.1.1
21Be8c6jB9B:1521-1722Helicase_C2004 → 2004.1 → 2004.1.1
22Be8c6jB10B:2016-2128Sec6311 → 11.1 → 11.1.1
23Be8c6jB11B:1958-2015102.5.1.0102 → 102.5 → 102.5.1
24Be8c6jB12B:1825-19574156.1.1.04156 → 4156.1 → 4156.1.1
25ce8c6jc1c:1-80LSM4 → 4.1 → 4.1.1
26Ce8c6jC1C:660-828EFG_IV212 → 212.1 → 212.1.1
27Ce8c6jC2C:56-439GTP_EFTU,EFTUD22004 → 2004.1 → 2004.1.1
28Ce8c6jC3C:581-659EFG_III304 → 304.24 → 304.24.1
29Ce8c6jC4C:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
30Ce8c6jC5C:829-954EFG_C304 → 304.24 → 304.24.1
31C3e8c6jC31C3:1-160Pro_isomerase75 → 75.1 → 75.1.1
32CDe8c6jCD1CD:154-398DEAD2004 → 2004.1 → 2004.1.1
33CEe8c6jCE1CE:5-83RRM_1304 → 304.9 → 304.9.1
34CIe8c6jCI1CI:39-94Isy1192 → 192.13 → 192.13.1
35de8c6jd1d:2-85LSM4 → 4.1 → 4.1.1
36ee8c6je1e:13-91LSM4 → 4.1 → 4.1.1
37fe8c6jf1f:4-75LSM4 → 4.1 → 4.1.1
38ge8c6jg1g:4-76LSM4 → 4.1 → 4.1.1
39he8c6jh1h:62-196PF30379396 → 396.3 → 396.3.1
40he8c6jh2h:265-371Slu77101 → 7101.1 → 7101.1.1
41He8c6jH1H:149-406MIF4G109 → 109.4 → 109.4.1
42He8c6jH2H:448-648MA3109 → 109.4 → 109.4.1
43ie8c6ji1i:3-166Pro_isomerase75 → 75.1 → 75.1.1
44Je8c6jJ1J:184-496WD405 → 5.1 → 5.1.4
45ke8c6jk1k:6-87LSM4 → 4.1 → 4.1.1
46le8c6jl1l:1-80LSM4 → 4.1 → 4.1.1
47Le8c6jL1L:1-144BUD313952 → 3952.1 → 3952.1.1
48me8c6jm1m:13-115LSM4 → 4.1 → 4.1.1
49Me8c6jM1M:90-220zf-CCCH_RBM22906 → 906.1 → 906.1.1
50Me8c6jM2M:18-89STL11_N376 → 376.1 → 376.1.3
51Me8c6jM3M:221-306RRM_1304 → 304.9 → 304.9.1
52ne8c6jn1n:2-84LSM4 → 4.1 → 4.1.1
53Ne8c6jN1N:52-357WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
54oe8c6jo1o:67-579WD405 → 5.1 → 5.1.4
55Oe8c6jO1O:8-64Myb_DNA-binding101 → 101.1 → 101.1.1
56Oe8c6jO2O:62-110Myb_DNA-binding101 → 101.1 → 101.1.1
57pe8c6jp1p:11-91LSM4 → 4.1 → 4.1.1
58qe8c6jq1q:4-75LSM4 → 4.1 → 4.1.1
59re8c6jr1r:4-76LSM4 → 4.1 → 4.1.1
60Se8c6jS1S:15-656HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376109 → 109.4 → 109.4.1
61te8c6jt1t:68-134,t:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
62Te8c6jT1T:19-749TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N109 → 109.4 → 109.4.1
63ue8c6ju1u:68-134,u:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
64Ue8c6jU1U:707-753,U:773-794Aquarius_N_3rd3940 → 3940.1 → 3940.1.1
65Ue8c6jU2U:416-492,U:660-706,U:795-1134ResIII, AAA_112004 → 2004.1 → 2004.1.1
66Ue8c6jU3U:493-659Aquarius_N_2nd1 → 1.1 → 1.1.7
67Ue8c6jU4U:1135-1376AAA_122004 → 2004.1 → 2004.1.1
68Ue8c6jU5U:19-415Aquarius_N_1st109 → 109.4 → 109.4.1
69ve8c6jv1v:68-134,v:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
70Ve8c6jV1V:260-355,V:609-610,V:800-805S12 → 2.1 → 2.1.1
71Ve8c6jV2V:566-608,V:611-743DEAD2004 → 2004.1 → 2004.1.1
72Ve8c6jV3V:744-799,V:806-911,V:914-917Helicase_C2004 → 2004.1 → 2004.1.1
73Ve8c6jV4V:912-913,V:918-975,V:977-987HA2_N101 → 101.1 → 101.1.2
74Ve8c6jV5V:961-1108HA2_N,HA2_C4156 → 4156.1 → 4156.1.1
75Ve8c6jV6V:1109-1183OB_NTP_bind2 → 2.1 → 2.1.1
76we8c6jw1w:68-134,w:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
77We8c6jW1W:1-176LRR_9207 → 207.1 → 207.1.1
78Ye8c6jY1Y:3-94RRM_1304 → 304.9 → 304.9.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors