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PDB 8CEN

ELECTRON MICROSCOPY0 chains71 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (71)

#ChainDomain IDRangeFamilyClassification
10e8cen010:504-718Helicase_C_22004 → 2004.1 → 2004.1.1
20e8cen020:18-244DEAD_22004 → 2004.1 → 2004.1.1
32e8cen212:447-508Tfb2_C4340 → 4340.1 → 4340.1.1
43e8cen313:80-139MAT1386 → 386.1 → 386.1.1
53e8cen323:9-79zf-C3HC4_5376 → 376.1 → 376.1.1
64e8cen414:21-285Tfb42006 → 2006.1 → 2006.1.6
74e8cen424:286-328375.1.1.0375 → 375.1 → 375.1.1
85e8cen515:2-66Tfb54340 → 4340.1 → 4340.1.1
96e8cen616:308-374375.1.1.0375 → 375.1 → 375.1.1
106e8cen626:107-307Ssl12006 → 2006.1 → 2006.1.6
116e8cen636:375-457C1_4376 → 376.1 → 376.1.2
127e8cen717:294-538ResIII2004 → 2004.1 → 2004.1.1
137e8cen727:549-785Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
14ae8cena1a:3-52,a:100-206,a:277-288Med63195 → 3195.1 → 3195.1.1
15Ae8cenA1A:1060-1102,A:1301-1445RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
16Ae8cenA2A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
17Ae8cenA3A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
18Ae8cenA4A:2-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
19Ae8cenA5A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
20Ae8cenA6A:1103-1131,A:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
21Ae8cenA7A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
22Ae8cenA8A:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
23Ae8cenA9A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
24be8cenb1b:21-172,b:193-213Med83560 → 3560.1 → 3560.1.1
25Be8cenB1B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
26Be8cenB2B:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
27Be8cenB3B:18-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
28Be8cenB4B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
29Be8cenB5B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
30Be8cenB6B:631-813RNA_pol_Rpb2_6,RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
31Be8cenB7B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
32ce8cenc1c:1-111Med113712 → 3712.1 → 3712.1.1
33Ce8cenC1C:3-41,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
34Ce8cenC2C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
35de8cend1d:182-6873561.1.1.03561 → 3561.1 → 3561.1.1
36De8cenD1D:11-71,D:131-220RNA_pol_Rpb4102 → 102.1 → 102.1.1
37ee8cene1e:1-107,e:159-302Med18868 → 868.1 → 868.1.1
38Ee8cenE1E:2-142RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
39Ee8cenE2E:143-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
40fe8cenf1f:2-210Med20868 → 868.1 → 868.1.1
41Fe8cenF1F:34-35,F:62-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
42ge8ceng1g:2-118Med223559 → 3559.1 → 3559.1.1
43Ge8cenG1G:69-171S12 → 2.1 → 2.1.1
44Ge8cenG2G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
45He8cenH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
46ie8ceni1i:108-214Med74207 → 4207.1 → 4207.1.2
47ie8ceni2i:9-83Med73548 → 3548.1 → 3548.1.1
48Ie8cenI1I:50-117TFIIS_C375 → 375.1 → 375.1.1
49Ie8cenI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
50Je8cenJ1J:1-69RNA_pol_N101 → 101.4 → 101.4.1
51Ke8cenK1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
52Le8cenL1L:26-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
53Me8cenM1M:231-342TFIIB101 → 101.1 → 101.1.10
54Me8cenM2M:78-230TFIIB101 → 101.1 → 101.1.10
55Me8cenM3M:14-58TF_Zn_Ribbon375 → 375.1 → 375.1.1
56ne8cenn1n:3-138Med214207 → 4207.1 → 4207.1.1
57oe8ceno1o:17-126Med313548 → 3548.1 → 3548.1.1
58Oe8cenO1O:60-156TBP331 → 331.1 → 331.1.1
59Oe8cenO2O:157-240TBP331 → 331.1 → 331.1.1
60Qe8cenQ1Q:21-35,Q:97-142,Q:327-415TFIIF_alpha59 → 59.1 → 59.1.1
61Re8cenR1R:58-138,R:207-227TFIIF_beta_N59 → 59.1 → 59.1.1
62Re8cenR2R:291-370TFIIF_beta101 → 101.1 → 101.1.2
63Ue8cenU1U:229-286TFIIA74 → 74.1 → 74.1.1
64Ue8cenU2U:3-56TFIIA104 → 104.1 → 104.1.1
65Ve8cenV1V:5-54TFIIA_gamma_N104 → 104.1 → 104.1.1
66Ve8cenV2V:55-122TFIIA_gamma_C74 → 74.1 → 74.1.1
67We8cenW1W:1-102,W:173-213TFIIE_alpha101 → 101.1 → 101.1.2
68We8cenW2W:103-172TF_Zn_Ribbon375 → 375.1 → 375.1.1
69Xe8cenX1X:188-249TFA2_Winged_2101 → 101.1 → 101.1.2
70Xe8cenX2X:123-187TFIIE_beta101 → 101.1 → 101.1.2
71Xe8cenX3X:256-280TFA2_E-tether101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors