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PDB 8CEO

ELECTRON MICROSCOPY0 chains80 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (80)

#ChainDomain IDRangeFamilyClassification
10e8ceo010:503-723Helicase_C_22004 → 2004.1 → 2004.1.1
20e8ceo020:1-250,0:438-502,0:724-752DEAD_22004 → 2004.1 → 2004.1.1
30e8ceo030:247-441HBB3636 → 3636.1 → 3636.1.1
42e8ceo212:447-508Tfb2_C4340 → 4340.1 → 4340.1.1
53e8ceo313:9-79zf-C3HC4_5376 → 376.1 → 376.1.1
63e8ceo323:80-139MAT1386 → 386.1 → 386.1.1
74e8ceo414:21-285Tfb42006 → 2006.1 → 2006.1.6
84e8ceo424:286-328375.1.1.0375 → 375.1 → 375.1.1
95e8ceo515:2-66Tfb54340 → 4340.1 → 4340.1.1
106e8ceo616:308-374375.1.1.0375 → 375.1 → 375.1.1
116e8ceo626:107-307Ssl12006 → 2006.1 → 2006.1.6
126e8ceo636:375-457C1_4376 → 376.1 → 376.1.2
137e8ceo717:294-538ResIII2004 → 2004.1 → 2004.1.1
147e8ceo727:549-785Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
15ae8ceoa1a:3-52,a:100-206,a:277-288Med63195 → 3195.1 → 3195.1.1
16Ae8ceoA1A:1060-1102,A:1301-1445RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
17Ae8ceoA2A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
18Ae8ceoA3A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
19Ae8ceoA4A:2-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
20Ae8ceoA5A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
21Ae8ceoA6A:1103-1131,A:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
22Ae8ceoA7A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
23Ae8ceoA8A:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
24Ae8ceoA9A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
25be8ceob1b:22-213Med83560 → 3560.1 → 3560.1.1
26Be8ceoB1B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
27Be8ceoB2B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
28Be8ceoB3B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
29Be8ceoB4B:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
30Be8ceoB5B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
31Be8ceoB6B:631-813RNA_pol_Rpb2_6,RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
32Be8ceoB7B:18-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
33ce8ceoc1c:1-111Med113712 → 3712.1 → 3712.1.1
34Ce8ceoC1C:38-172RNA_pol_A_bac240 → 240.2 → 240.2.1
35Ce8ceoC2C:3-37,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
36de8ceod1d:182-6873561.1.1.03561 → 3561.1 → 3561.1.1
37De8ceoD1D:11-71,D:131-220RNA_pol_Rpb4102 → 102.1 → 102.1.1
38ee8ceoe1e:1-107,e:159-302Med18868 → 868.1 → 868.1.1
39Ee8ceoE1E:2-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
40Ee8ceoE2E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
41fe8ceof1f:2-210Med20868 → 868.1 → 868.1.1
42Fe8ceoF1F:34-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
43ge8ceog1g:2-118Med223559 → 3559.1 → 3559.1.1
44Ge8ceoG1G:69-171S12 → 2.1 → 2.1.1
45Ge8ceoG2G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
46He8ceoH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
47ie8ceoi1i:9-83Med73548 → 3548.1 → 3548.1.1
48ie8ceoi2i:111-214Med74207 → 4207.1 → 4207.1.2
49Ie8ceoI1I:50-117TFIIS_C375 → 375.1 → 375.1.1
50Ie8ceoI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
51Je8ceoJ1J:1-69RNA_pol_N101 → 101.4 → 101.4.1
52Ke8ceoK1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
53Le8ceoL1L:26-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
54Me8ceoM1M:78-230TFIIB101 → 101.1 → 101.1.10
55Me8ceoM2M:14-58TF_Zn_Ribbon375 → 375.1 → 375.1.1
56Me8ceoM3M:231-342TFIIB101 → 101.1 → 101.1.10
57ne8ceon1n:3-138Med214207 → 4207.1 → 4207.1.1
58oe8ceoo1o:17-126Med313548 → 3548.1 → 3548.1.1
59Oe8ceoO1O:157-240TBP331 → 331.1 → 331.1.1
60Oe8ceoO2O:60-156TBP331 → 331.1 → 331.1.1
61Qe8ceoQ1Q:21-35,Q:97-142,Q:327-415TFIIF_alpha59 → 59.1 → 59.1.1
62re8ceor1r:38-134Histone148 → 148.1 → 148.1.1
63Re8ceoR1R:58-138,R:207-227TFIIF_beta_N59 → 59.1 → 59.1.1
64Re8ceoR2R:291-370TFIIF_beta101 → 101.1 → 101.1.2
65se8ceos1s:21-102CENP-T_C148 → 148.1 → 148.1.1
66te8ceot1t:11-119Histone,Histone_H2A_C148 → 148.1 → 148.1.1
67ue8ceou1u:26-122Histone148 → 148.1 → 148.1.1
68Ue8ceoU1U:3-56TFIIA104 → 104.1 → 104.1.1
69Ue8ceoU2U:229-286TFIIA74 → 74.1 → 74.1.1
70ve8ceov1v:37-134Histone148 → 148.1 → 148.1.1
71Ve8ceoV1V:5-54TFIIA_gamma_N104 → 104.1 → 104.1.1
72Ve8ceoV2V:55-122TFIIA_gamma_C74 → 74.1 → 74.1.1
73we8ceow1w:23-102CENP-T_C148 → 148.1 → 148.1.1
74We8ceoW1W:1-102,W:173-213TFIIE_alpha101 → 101.1 → 101.1.2
75We8ceoW2W:103-172TF_Zn_Ribbon375 → 375.1 → 375.1.1
76xe8ceox1x:13-118Histone,Histone_H2A_C148 → 148.1 → 148.1.1
77Xe8ceoX1X:188-249TFA2_Winged_2101 → 101.1 → 101.1.2
78Xe8ceoX2X:123-187TFIIE_beta101 → 101.1 → 101.1.2
79Xe8ceoX3X:256-280TFA2_E-tether101 → 101.1 → 101.1.2
80ye8ceoy1y:28-122Histone148 → 148.1 → 148.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors