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PDB 8CH6

ELECTRON MICROSCOPY0 chains89 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (89)

#ChainDomain IDRangeFamilyClassification
11e8ch6111:14-92LSM4 → 4.1 → 4.1.1
22e8ch6212:2-75LSM4 → 4.1 → 4.1.1
33e8ch6313:4-79LSM4 → 4.1 → 4.1.1
44e8ch6414:20-116LSM4 → 4.1 → 4.1.1
55e8ch6515:1-82LSM4 → 4.1 → 4.1.1
68e8ch6818:4-89LSM4 → 4.1 → 4.1.1
79e8ch6919:4-76LSM4 → 4.1 → 4.1.1
8ae8ch6a1a:53-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
9ae8ch6a2a:1755-2016PRP8_domainIV2484 → 2484.1 → 2484.1.1
10ae8ch6a3a:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
11ae8ch6a4a:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
12ae8ch6a5a:811-1182RRM_4304 → 304.48 → 304.48.1
13ae8ch6a6a:2067-2316JAB,PROCT2492 → 2492.1 → 2492.1.1
14Ae8ch6A1A:1-403MMS1_N5 → 5.1 → 5.1.4
15Ae8ch6A2A:442-772Beta-prop_RSE1_2nd5 → 5.1 → 5.1.4
16Ae8ch6A3A:404-441,A:773-1061,A:1068-1114CPSF_A5 → 5.1 → 5.1.4
17Ae8ch6A4A:1115-1197CPSF_A101 → 101.1 → 101.1.1
18be8ch6b1b:55-439GTP_EFTU,EFTUD22004 → 2004.1 → 2004.1.1
19be8ch6b2b:581-659EFG_III304 → 304.24 → 304.24.1
20be8ch6b3b:829-952EFG_C304 → 304.24 → 304.24.1
21be8ch6b4b:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
22be8ch6b5b:660-828EFG_IV212 → 212.1 → 212.1.1
23Be8ch6B1B:10-80SF3b101106 → 1106.1 → 1106.1.1
24ce8ch6c1c:887-993SNRNP200_wHTH101 → 101.1 → 101.1.2
25ce8ch6c2c:404-682DEAD2004 → 2004.1 → 2004.1.1
26ce8ch6c3c:994-11254156.1.1.04156 → 4156.1 → 4156.1.1
27ce8ch6c4c:1312-1520DEAD2004 → 2004.1 → 2004.1.1
28ce8ch6c5c:1958-2015102.5.1.0102 → 102.5 → 102.5.1
29ce8ch6c6c:1181-1311Sec6311 → 11.1 → 11.1.1
30ce8ch6c7c:1825-19574156.1.1.04156 → 4156.1 → 4156.1.1
31ce8ch6c8c:683-886Helicase_C2004 → 2004.1 → 2004.1.1
32ce8ch6c9c:1126-1180102.5.1.0102 → 102.5 → 102.5.1
33ce8ch6c10c:1521-1722Helicase_C2004 → 2004.1 → 2004.1.1
34ce8ch6c11c:2016-2125Sec6311 → 11.1 → 11.1.1
35ce8ch6c12c:1723-1824SNRNP200_wHTH101 → 101.1 → 101.1.2
36Ce8ch6C1C:490-1304PPP2R1A-like_HEAT109 → 109.4 → 109.4.1
37De8ch6D1D:3-91PHF5377 → 377.1 → 377.1.4
38Fe8ch6F1F:12-89RRM_1304 → 304.9 → 304.9.1
39he8ch6h1h:6-75LSM4 → 4.1 → 4.1.1
40He8ch6H1H:160-285574.1.1.0574 → 574.1 → 574.1.1
41ie8ch6i1i:15-88LSM4 → 4.1 → 4.1.1
42Ie8ch6I1I:114-223SF3A2319 → 319.2 → 319.2.1
43Ie8ch6I2I:1-86zf-met386 → 386.1 → 386.1.1
44je8ch6j1j:5-72LSM4 → 4.1 → 4.1.1
45Je8ch6J1J:2-353130.1.1.0130 → 130.1 → 130.1.1
46ke8ch6k1k:2-80LSM4 → 4.1 → 4.1.1
47Ke8ch6K1K:68-134,K:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
48le8ch6l1l:27-111LSM4 → 4.1 → 4.1.1
49me8ch6m1m:4-72LSM4 → 4.1 → 4.1.1
50Me8ch6M1M:68-134,M:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
51ne8ch6n1n:6-84LSM4 → 4.1 → 4.1.1
52Ne8ch6N01N:386-574DEAD2004 → 2004.1 → 2004.1.1
53Ne8ch6N02N:575-750Helicase_C2004 → 2004.1 → 2004.1.1
54Ne8ch6N03N:751-931HA2_N,HA2_C4156 → 4156.1 → 4156.1.1
55Ne8ch6N04N:932-1025OB_NTP_bind2 → 2.1 → 2.1.1
56oe8ch6o1o:58-356WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
57Oe8ch6O1O:185-504WD405 → 5.1 → 5.1.4
58pe8ch6p1p:8-166Pro_isomerase75 → 75.1 → 75.1.1
59Pe8ch6P1P:8-64Myb_DNA-binding101 → 101.1 → 101.1.1
60Pe8ch6P2P:62-110Myb_DNA-binding101 → 101.1 → 101.1.1
61re8ch6r1r:2-163LRR_9207 → 207.1 → 207.1.1
62Re8ch6R1R:68-134,R:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
63se8ch6s1s:85-96,s:145-224RRM_1304 → 304.9 → 304.9.1
64se8ch6s2s:7-84RRM_1304 → 304.9 → 304.9.1
65te8ch6t1t:39-94Isy1192 → 192.13 → 192.13.1
66Te8ch6T1T:2-143BUD313952 → 3952.1 → 3952.1.1
67ue8ch6u01u:43-105376.1.1.0376 → 376.1 → 376.1.1
68ue8ch6u02u:106-159304.9.1.0304 → 304.9 → 304.9.1
69ue8ch6u03u:280-457Pro_isomerase75 → 75.1 → 75.1.1
70Ue8ch6U1U:90-220zf-CCCH_RBM22906 → 906.1 → 906.1.1
71Ue8ch6U2U:221-303RRM_1304 → 304.9 → 304.9.1
72Ue8ch6U3U:9-89STL11_N376 → 376.1 → 376.1.3
73ve8ch6v1v:68-134,v:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
74Ve8ch6V01V:1-166Pro_isomerase75 → 75.1 → 75.1.1
75Ve8ch6V02V:242-314RRM_1304 → 304.9 → 304.9.1
76we8ch6w1w:138-299Pro_isomerase75 → 75.1 → 75.1.1
77we8ch6w2w:5-77RRM_1304 → 304.9 → 304.9.1
78We8ch6W1W:450-650MA3109 → 109.4 → 109.4.1
79We8ch6W2W:149-406MIF4G109 → 109.4 → 109.4.1
80xe8ch6x1x:209-578WD405 → 5.1 → 5.1.4
81Xe8ch6X1X:216-461HAT_Syf1_CNRKL1_C109 → 109.4 → 109.4.1
82ye8ch6y1y:416-492,y:660-706,y:795-1134ResIII, AAA_112004 → 2004.1 → 2004.1.1
83ye8ch6y2y:707-752,y:773-794Aquarius_N_3rd3940 → 3940.1 → 3940.1.1
84ye8ch6y3y:1135-1373AAA_122004 → 2004.1 → 2004.1.1
85ye8ch6y4y:493-659Aquarius_N_2nd1 → 1.1 → 1.1.7
86ye8ch6y5y:21-415Aquarius_N_1st109 → 109.4 → 109.4.1
87ze8ch6z1z:22-738TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N109 → 109.4 → 109.4.1
88Ze8ch6Z1Z:189-229zf-CCCH906 → 906.1 → 906.1.1
89Ze8ch6Z2Z:230-235,Z:262-309zf-C3HC4_3376 → 376.1 → 376.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors