PDB 8CQ0
ELECTRON MICROSCOPY0 chains50 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
10 domainsChain Bview chain
10 domainsChain Cview chain
10 domainsChain Dview chain
10 domainsAll Domains (50)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8cq0A01 | A:90-223,A:883-1041 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 2 | A | e8cq0A02 | A:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 3 | A | e8cq0A03 | A:434-513,A:647-889 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 4 | A | e8cq0A04 | A:514-646 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 5 | A | e8cq0A05 | A:1091-1309,A:1563-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 6 | A | e8cq0A06 | A:1362-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 7 | A | e8cq0A07 | A:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 8 | A | e8cq0A08 | A:1853-1893 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 9 | A | e8cq0A09 | A:1973-2327 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 10 | A | e8cq0A10 | A:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 11 | B | e8cq0B1 | B:109-242,B:902-1060 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 12 | B | e8cq0B2 | B:317-452 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 13 | B | e8cq0B3 | B:453-532,B:666-908 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 14 | B | e8cq0B4 | B:533-665 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 15 | B | e8cq0B5 | B:1110-1328,B:1582-1626 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 16 | B | e8cq0B6 | B:1381-1509 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 17 | B | e8cq0B7 | B:1652-1780 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 18 | B | e8cq0B8 | B:1872-1912 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 19 | B | e8cq0B9 | B:1992-2346 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 20 | B | e8cq0B10 | B:2347-2535 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 21 | C | e8cq0C1 | C:109-242,C:902-1060 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 22 | C | e8cq0C2 | C:317-452 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 23 | C | e8cq0C3 | C:453-532,C:666-908 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 24 | C | e8cq0C4 | C:533-665 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 25 | C | e8cq0C5 | C:1110-1328,C:1582-1626 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 26 | C | e8cq0C6 | C:1381-1509 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 27 | C | e8cq0C7 | C:1652-1780 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 28 | C | e8cq0C8 | C:1872-1912 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 29 | C | e8cq0C9 | C:1992-2346 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 30 | C | e8cq0C10 | C:2347-2535 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 31 | D | e8cq0D1 | D:109-242,D:902-1060 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 32 | D | e8cq0D2 | D:317-452 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 33 | D | e8cq0D3 | D:453-532,D:666-908 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 34 | D | e8cq0D4 | D:533-665 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 35 | D | e8cq0D5 | D:1110-1328,D:1582-1626 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 36 | D | e8cq0D6 | D:1381-1509 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 37 | D | e8cq0D7 | D:1652-1780 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 38 | D | e8cq0D8 | D:1872-1912 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 39 | D | e8cq0D9 | D:1992-2346 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 40 | D | e8cq0D10 | D:2347-2535 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 41 | E | e8cq0E1 | E:109-242,E:902-1060 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 42 | E | e8cq0E2 | E:317-452 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 43 | E | e8cq0E3 | E:453-532,E:666-908 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 44 | E | e8cq0E4 | E:533-665 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 45 | E | e8cq0E5 | E:1110-1328,E:1582-1626 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 46 | E | e8cq0E6 | E:1381-1509 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 47 | E | e8cq0E7 | E:1652-1780 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 48 | E | e8cq0E8 | E:1872-1912 | 3833.1.1.0 | 3833 → 3833.1 → 3833.1.1 |
| 49 | E | e8cq0E9 | E:1992-2346 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 50 | E | e8cq0E10 | E:2347-2535 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors