PDB 8D0K
ELECTRON MICROSCOPY0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
3 domainsChain Cview chain
1 domainChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
6 domainsChain Gview chain
2 domainsAll Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e8d0kB1 | B:7-183 | tRNA_anti-codon | 2 → 2.1 → 2.1.1 |
| 2 | B | e8d0kB2 | B:184-294 | STN1_2 | 101 → 101.1 → 101.1.2 |
| 3 | B | e8d0kB3 | B:295-368 | STN1_2 | 101 → 101.1 → 101.1.2 |
| 4 | C | e8d0kC1 | C:3-123 | Ten1_2 | 2 → 2.1 → 2.1.1 |
| 5 | D | e8d0kD1 | D:192-304 | 3054.1.1.0 | 3054 → 3054.1 → 3054.1.1 |
| 6 | D | e8d0kD2 | D:2-191,D:305-420 | DNA_primase_S | 862 → 862.1 → 862.1.1 |
| 7 | E | e8d0kE1 | E:258-455 | DNA_primase_lrg | 182 → 182.1 → 182.1.2 |
| 8 | E | e8d0kE2 | E:16-257 | DNA_primase_lrg_N | 4271 → 4271.1 → 4271.1.1 |
| 9 | F | e8d0kF1 | F:530-807 | DNA_pol_B_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 10 | F | e8d0kF2 | F:842-1075,F:1266-1267 | DNA_pol_B | 304 → 304.48 → 304.48.1 |
| 11 | F | e8d0kF3 | F:1344-1462 | zf-DNA_Pol | 375 → 375.10 → 375.10.1 |
| 12 | F | e8d0kF4 | F:384-481 | 304.114.1.0 | 304 → 304.114 → 304.114.1 |
| 13 | F | e8d0kF5 | F:1266-1343 | zf-DNA_Pol | 375 → 375.10 → 375.10.1 |
| 14 | F | e8d0kF6 | F:324-383,F:482-529 | DNA_pol_B_exo1 | 2 → 2.1 → 2.1.1 |
| 15 | G | e8d0kG1 | G:203-329 | DPOA2_OB | 2 → 2.1 → 2.1.1 |
| 16 | G | e8d0kG2 | G:143-202,G:330-598 | DNA_pol_E_B | 246 → 246.2 → 246.2.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors