PDB 8DAU
ELECTRON MICROSCOPY0 chains39 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
6 domainsChain Bview chain
6 domainsChain Cview chain
6 domainsChain Dview chain
4 domainsChain Eview chain
4 domainsChain Fview chain
4 domainsChain Hview chain
2 domainsChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainAll Domains (39)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8dauA1 | A:33-116 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 2 | A | e8dauA2 | A:117-210 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 3 | A | e8dauA3 | A:211-381 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 4 | A | e8dauA4 | A:382-475 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 5 | A | e8dauA5 | A:476-658 | AAA, RuvB_N | 2004 → 2004.1 → 2004.1.1 |
| 6 | A | e8dauA6 | A:659-715,A:748-786 | 148.1.3.0 | 148 → 148.1 → 148.1.3 |
| 7 | B | e8dauB1 | B:382-475 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 8 | B | e8dauB2 | B:659-715,B:748-786 | 148.1.3.0 | 148 → 148.1 → 148.1.3 |
| 9 | B | e8dauB3 | B:117-210 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 10 | B | e8dauB4 | B:476-658 | AAA, RuvB_N | 2004 → 2004.1 → 2004.1.1 |
| 11 | B | e8dauB5 | B:211-381 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 12 | B | e8dauB6 | B:21-116 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 13 | C | e8dauC01 | C:-2-116 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 14 | C | e8dauC02 | C:117-198 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 15 | C | e8dauC03 | C:199-382 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 16 | C | e8dauC04 | C:383-447 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 17 | C | e8dauC05 | C:448-670 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 18 | C | e8dauC06 | C:659-784 | Vps4_C,AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 19 | D | e8dauD1 | D:659-716,D:750-786 | Vps4_C,AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 20 | D | e8dauD2 | D:71-76,D:97-103,D:205-381 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 21 | D | e8dauD3 | D:382-476 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 22 | D | e8dauD4 | D:473-658 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 23 | E | e8dauE1 | E:382-476 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 24 | E | e8dauE2 | E:659-716,E:750-786 | Vps4_C,AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 25 | E | e8dauE3 | E:473-658 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 26 | E | e8dauE4 | E:207-381 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 27 | F | e8dauF1 | F:72-75,F:96-104,F:201-381 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 28 | F | e8dauF2 | F:659-716,F:750-786 | Vps4_C,AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 29 | F | e8dauF3 | F:473-658 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 30 | F | e8dauF4 | F:382-476 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 31 | G | e8dauG1 | G:235-479 | NPL4 | 2492 → 2492.1 → 2492.1.1 |
| 32 | G | e8dauG2 | G:480-580 | NPL4 | 7051 → 7051.1 → 7051.1.1 |
| 33 | G | e8dauG3 | G:106-179 | zf-NPL4 | 7050 → 7050.1 → 7050.1.1 |
| 34 | G | e8dauG4 | G:180-234 | zf-NPL4 | 7050 → 7050.1 → 7050.1.1 |
| 35 | H | e8dauH1 | H:1-120 | UFD1 | 1 → 1.1 → 1.1.2 |
| 36 | H | e8dauH2 | H:121-231 | UFD1_N2 | 229 → 229.1 → 229.1.1 |
| 37 | I | e8dauI1 | I:13-50 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 38 | J | e8dauJ1 | J:101-176 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 39 | K | e8dauK1 | K:201-276 | ubiquitin | 221 → 221.1 → 221.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors