PDB 8DF5
X-RAY DIFFRACTION2.70 Å0 chains20 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
1 domainChain Fview chain
1 domainChain Hview chain
2 domainsChain Lview chain
2 domainsChain Mview chain
2 domainsChain Nview chain
2 domainsChain Rview chain
1 domainChain Sview chain
1 domainAll Domains (20)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8df5A1 | A:1-127 | V-set | 11 → 11.1 → 11.1.1 |
| 2 | A | e8df5A2 | A:128-228 | C1-set | 11 → 11.1 → 11.1.1 |
| 3 | B | e8df5B1 | B:108-214 | C1-set | 11 → 11.1 → 11.1.1 |
| 4 | B | e8df5B2 | B:1-107 | V-set | 11 → 11.1 → 11.1.1 |
| 5 | C | e8df5C1 | C:128-230 | C1-set | 11 → 11.1 → 11.1.1 |
| 6 | C | e8df5C2 | C:1-127 | V-set | 11 → 11.1 → 11.1.1 |
| 7 | D | e8df5D1 | D:1-107 | V-set | 11 → 11.1 → 11.1.1 |
| 8 | D | e8df5D2 | D:108-214 | C1-set | 11 → 11.1 → 11.1.1 |
| 9 | E | e8df5E1 | E:19-612 | Peptidase_M2 | 2498 → 2498.1 → 2498.1.1 |
| 10 | F | e8df5F1 | F:19-614 | Peptidase_M2 | 2498 → 2498.1 → 2498.1.1 |
| 11 | H | e8df5H1 | H:1-120 | V-set | 11 → 11.1 → 11.1.1 |
| 12 | H | e8df5H2 | H:121-223 | C1-set | 11 → 11.1 → 11.1.1 |
| 13 | L | e8df5L1 | L:1-108 | V-set | 11 → 11.1 → 11.1.1 |
| 14 | L | e8df5L2 | L:109-215 | C1-set | 11 → 11.1 → 11.1.1 |
| 15 | M | e8df5M1 | M:121-221 | C1-set | 11 → 11.1 → 11.1.1 |
| 16 | M | e8df5M2 | M:1-120 | V-set | 11 → 11.1 → 11.1.1 |
| 17 | N | e8df5N1 | N:109-215 | C1-set | 11 → 11.1 → 11.1.1 |
| 18 | N | e8df5N2 | N:1-108 | V-set | 11 → 11.1 → 11.1.1 |
| 19 | R | e8df5R1 | R:330-529 | bCoV_S1_RBD | 4169 → 4169.1 → 4169.1.1 |
| 20 | S | e8df5S1 | S:332-529 | bCoV_S1_RBD | 4169 → 4169.1 → 4169.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors