PDB 8DKC
ELECTRON MICROSCOPY0 chains22 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
10 domainsChain Eview chain
1 domainAll Domains (22)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8dkcA1 | A:51-175 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e8dkcA2 | A:5-50,A:176-235 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e8dkcB1 | B:5-50,B:176-235 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e8dkcB2 | B:51-175 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e8dkcC1 | C:678-757 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 6 | C | e8dkcC2 | C:150-221,C:306-412 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | C | e8dkcC3 | C:758-795,C:1043-1166 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 8 | C | e8dkcC4 | C:1167-1269 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 9 | C | e8dkcC5 | C:2-149,C:413-538 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 10 | C | e8dkcC6 | C:539-677 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 11 | C | e8dkcC7 | C:796-1042 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | D | e8dkcD01 | D:189-360 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 13 | D | e8dkcD02 | D:361-392,D:433-513 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 14 | D | e8dkcD03 | D:393-432 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 15 | D | e8dkcD04 | D:514-648 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 16 | D | e8dkcD05 | D:649-812 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 17 | D | e8dkcD06 | D:813-939 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 18 | D | e8dkcD07 | D:940-1026 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 19 | D | e8dkcD08 | D:1027-1118 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 20 | D | e8dkcD09 | D:1119-1204 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 21 | D | e8dkcD10 | D:1205-1392 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 22 | E | e8dkcE1 | E:8-110 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors