PDB 8DY7
ELECTRON MICROSCOPY0 chains27 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
8 domainsChain Eview chain
1 domainChain Gview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsAll Domains (27)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8dy7A1 | A:2-47,A:170-226 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e8dy7A2 | A:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e8dy7B1 | B:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e8dy7B2 | B:1-47,B:170-236 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | C | e8dy7C1 | C:506-641 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 6 | C | e8dy7C2 | C:1038-1150 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 7 | C | e8dy7C3 | C:713-750,C:883-1037 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 8 | C | e8dy7C4 | C:187-379 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 9 | C | e8dy7C5 | C:33-186,C:380-505 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 10 | C | e8dy7C6 | C:751-882 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | C | e8dy7C7 | C:642-712 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 12 | D | e8dy7D01 | D:171-231,D:591-599,D:605-611,D:632-640 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | D | e8dy7D02 | D:232-258 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | D | e8dy7D03 | D:309-415 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 15 | D | e8dy7D04 | D:416-578 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 16 | D | e8dy7D05 | D:579-590,D:600-604,D:612-631,D:641-729 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 17 | D | e8dy7D06 | D:730-882 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 18 | D | e8dy7D07 | D:883-975 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 19 | D | e8dy7D08 | D:969-1259 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 20 | E | e8dy7E1 | E:9-85 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 21 | F | e8dy7F1 | F:351-407 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 22 | F | e8dy7F2 | F:379-381,F:408-514 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 23 | F | e8dy7F3 | F:214-350 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 24 | G | e8dy7G01 | G:1-100 | RbpA | 375 → 375.1 → 375.1.1 |
| 25 | H | e8dy7H1 | H:1-85 | Whib | 1022 → 1022.2 → 1022.2.1 |
| 26 | I | e8dy7I1 | I:100-214 | LAGLIDADG_WhiA | 242 → 242.1 → 242.1.1 |
| 27 | I | e8dy7I2 | I:1-99 | WhiA_N | 242 → 242.1 → 242.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors