PDB 8E8M
ELECTRON MICROSCOPY0 chains20 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
8 domainsChain Eview chain
1 domainAll Domains (20)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8e8mA1 | A:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e8e8mA2 | A:1-47,A:170-226 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e8e8mB1 | B:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e8e8mB2 | B:1-47,B:170-237 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | C | e8e8mC1 | C:639-709 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 6 | C | e8e8mC2 | C:503-638 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 7 | C | e8e8mC3 | C:1036-1139 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e8e8mC4 | C:710-747,C:880-1035 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 9 | C | e8e8mC5 | C:748-879 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | C | e8e8mC6 | C:182-376 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | C | e8e8mC7 | C:30-181,C:377-502 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 12 | D | e8e8mD1 | D:173-233,D:468-470,D:485-485,D:601-602,D:642-648,D:684-684 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | D | e8e8mD2 | D:234-260 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | D | e8e8mD3 | D:301-415 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 15 | D | e8e8mD4 | D:416-467,D:471-484,D:486-578 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 16 | D | e8e8mD5 | D:579-600,D:603-641,D:649-683,D:685-734 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 17 | D | e8e8mD6 | D:735-889 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 18 | D | e8e8mD7 | D:890-983 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 19 | D | e8e8mD8 | D:977-1284 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 20 | E | e8e8mE1 | E:27-109 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors