PDB 8F1K
ELECTRON MICROSCOPY0 chains29 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Gview chain
2 domainsChain Iview chain
10 domainsChain Jview chain
9 domainsChain Kview chain
1 domainAll Domains (29)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | G | e8f1kG1 | G:4-52,G:179-234 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | G | e8f1kG2 | G:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | H | e8f1kH1 | H:4-52,H:179-236 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | H | e8f1kH2 | H:237-325 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 5 | H | e8f1kH3 | H:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 6 | I | e8f1kI1 | I:152-225,I:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | I | e8f1kI2 | I:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 8 | I | e8f1kI3 | I:2-151,I:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 9 | I | e8f1kI4 | I:828-938,I:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | I | e8f1kI5 | I:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 11 | I | e8f1kI6 | I:939-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 12 | I | e8f1kI7 | I:1240-1341 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 13 | I | e8f1kI8 | I:578-712 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 14 | I | e8f1kI9 | I:226-234,I:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 15 | I | e8f1kI10 | I:791-827,I:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | J | e8f1kJ1 | J:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 17 | J | e8f1kJ2 | J:895-931,J:1214-1373 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 18 | J | e8f1kJ3 | J:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 19 | J | e8f1kJ4 | J:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 20 | J | e8f1kJ5 | J:3-341 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 21 | J | e8f1kJ6 | J:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 22 | J | e8f1kJ7 | J:1132-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 23 | J | e8f1kJ8 | J:1023-1131 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 24 | J | e8f1kJ9 | J:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 25 | K | e8f1kK1 | K:2-80 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 26 | M | e8f1kM1 | M:406-477 | Sigma54_DBD | 101 → 101.1 → 101.1.1 |
| 27 | M | e8f1kM2 | M:117-263 | Sigma54_CBD | 101 → 101.1 → 101.1.20 |
| 28 | M | e8f1kM3 | M:11-50,M:111-116 | Sigma54_AID | 1004 → 1004.1 → 1004.1.1 |
| 29 | M | e8f1kM4 | M:264-405 | 101.1.1.33 | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors