ECODEvolutionary Classification of Protein Domains

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PDB 8FOC

ELECTRON MICROSCOPY0 chains13 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1view chain

7 domains

e8foc11(1:532-815)e8foc12(1:1073-1228)e8foc13(1:848-1072)e8foc14(1:1345-1452)e8foc15(1:390-479)e8foc16(1:1273-1344)e8foc17(1:349-389,1:480-531)

Chain Aview chain

2 domains

e8focA1(A:6-192,A:314-402)e8focA2(A:193-313)

Chain Bview chain

2 domains

e8focB1(B:42-299)e8focB2(B:300-528)

Chain Cview chain

2 domains

e8focC1(C:369-580,C:606-705)e8focC2(C:248-368)

All Domains (13)

#	Chain	Domain ID	Range	Family	Classification
1	1	e8foc11	1:532-815	DNA_pol_B_exo1	2484 → 2484.1 → 2484.1.1
2	1	e8foc12	1:1073-1228	DNA_pol_B	4969 → 4969.1 → 4969.1.1
3	1	e8foc13	1:848-1072	DNA_pol_B	304 → 304.48 → 304.48.1
4	1	e8foc14	1:1345-1452	zf-DNA_Pol	375 → 375.10 → 375.10.1
5	1	e8foc15	1:390-479	304.114.1.0	304 → 304.114 → 304.114.1
6	1	e8foc16	1:1273-1344	zf-DNA_Pol	375 → 375.10 → 375.10.1
7	1	e8foc17	1:349-389,1:480-531	DNA_pol_B_exo1	2 → 2.1 → 2.1.1
8	A	e8focA1	A:6-192,A:314-402	DNA_primase_S	862 → 862.1 → 862.1.1
9	A	e8focA2	A:193-313	3054.1.1.0	3054 → 3054.1 → 3054.1.1
10	B	e8focB1	B:42-299	DNA_primase_lrg_N	4271 → 4271.1 → 4271.1.1
11	B	e8focB2	B:300-528	DNA_primase_lrg	182 → 182.1 → 182.1.2
12	C	e8focC1	C:369-580,C:606-705	DNA_pol_E_B	246 → 246.2 → 246.2.1
13	C	e8focC2	C:248-368	DPOA2_OB	2 → 2.1 → 2.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors