Home/PDB

PDB 8GYM

ELECTRON MICROSCOPY0 chains152 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (152)

#ChainDomain IDRangeFamilyClassification
12ee8gym2e12e:2-3222003.1.1.02003 → 2003.1 → 2003.1.1
22Ee8gym2E12E:2-322129.1.1.0129 → 129.1 → 129.1.1
32te8gym2t12t:3-724120.1.1.04120 → 4120.1 → 4120.1.1
42Te8gym2T12T:3-724120.1.1.04120 → 4120.1 → 4120.1.1
53te8gym3t13t:1-834120.1.1.04120 → 4120.1 → 4120.1.1
63Te8gym3T13T:1-834120.1.1.04120 → 4120.1 → 4120.1.1
74ae8gym4a14a:28-127132.1.1.0132 → 132.1 → 132.1.1
84Ae8gym4A14A:28-127132.1.1.0132 → 132.1 → 132.1.1
94le8gym4l14l:1-953843.1.1.03843 → 3843.1 → 3843.1.1
104Le8gym4L14L:1-953843.1.1.03843 → 3843.1 → 3843.1.1
116te8gym6t16t:1-704120.1.1.04120 → 4120.1 → 4120.1.1
126Te8gym6T16T:1-704120.1.1.04120 → 4120.1 → 4120.1.1
13a2e8gyma21a2:2-99L51_S25_CI-B82485 → 2485.1 → 2485.1.1
14A2e8gymA21A2:2-99L51_S25_CI-B82485 → 2485.1 → 2485.1.1
15a5e8gyma51a5:63-170ETC_C1_NDUFA56004 → 6004.1 → 6004.1.1
16A5e8gymA51A5:63-170ETC_C1_NDUFA56004 → 6004.1 → 6004.1.1
17a6e8gyma61a6:46-1721128.1.1.01128 → 1128.1 → 1128.1.1
18A6e8gymA61A6:46-1721128.1.1.01128 → 1128.1 → 1128.1.1
19a9e8gyma91a9:25-335Epimerase2003 → 2003.1 → 2003.1.1
20A9e8gymA91A9:23-362Epimerase2003 → 2003.1 → 2003.1.1
21abe8gymab1ab:62-138132.1.1.0132 → 132.1 → 132.1.1
22ABe8gymAB1AB:62-138132.1.1.0132 → 132.1 → 132.1.1
23ace8gymac1ac:67-133132.1.1.0132 → 132.1 → 132.1.1
24ACe8gymAC1AC:67-133132.1.1.0132 → 132.1 → 132.1.1
25ale8gymal1al:54-140NDUFA121129 → 1129.1 → 1129.1.1
26ALe8gymAL1AL:54-140NDUFA121129 → 1129.1 → 1129.1.1
27bpe8gymbp1bp:82-195,bp:215-462RCC1, RCC1_2, WD40_RLD5 → 5.1 → 5.1.4
28BPe8gymBP1BP:82-195,BP:215-462RCC1, RCC1_2, WD40_RLD5 → 5.1 → 5.1.4
29c1e8gymc11c1:229-628COX15038 → 5038.1 → 5038.1.1
30C1e8gymC11C1:229-628COX15038 → 5038.1 → 5038.1.1
31fse8gymfs1fs:78-1703087.1.3.03087 → 3087.1 → 3087.1.3
32FSe8gymFS1FS:78-1703087.1.3.03087 → 3087.1 → 3087.1.3
33fxe8gymfx1fx:27-172Fer2221 → 221.1 → 221.1.1
34FXe8gymFX1FX:27-172Fer2221 → 221.1 → 221.1.1
35g1e8gymg11g1:57-192Hexapep208 → 208.1 → 208.1.1
36G1e8gymG11G1:57-192Hexapep208 → 208.1 → 208.1.1
37g2e8gymg21g2:66-211DCTN5208 → 208.1 → 208.1.1
38G2e8gymG21G2:66-211DCTN5208 → 208.1 → 208.1.1
39g3e8gymg31g3:69-214Hexapep,Hexapep_2208 → 208.1 → 208.1.1
40G3e8gymG31G3:69-214Hexapep,Hexapep_2208 → 208.1 → 208.1.1
41m1e8gymm11m1:1-346Mito_carr5076 → 5076.1 → 5076.1.1
42M1e8gymM11M1:1-346Mito_carr5076 → 5076.1 → 5076.1.1
43m2e8gymm21m2:1-318Mito_carr5076 → 5076.1 → 5076.1.1
44M2e8gymM21M2:1-318Mito_carr5076 → 5076.1 → 5076.1.1
45n1e8gymn11n1:2-284NADHdh3281 → 3281.1 → 3281.1.2
46N1e8gymN11N1:2-284NADHdh3281 → 3281.1 → 3281.1.2
47n3e8gymn31n3:39-1213456.1.1.03456 → 3456.1 → 3456.1.1
48N3e8gymN31N3:39-1213456.1.1.03456 → 3456.1 → 3456.1.1
49n4e8gymn41n4:1-505Proton_antipo_M3281 → 3281.1 → 3281.1.1
50N4e8gymN41N4:1-505Proton_antipo_M3281 → 3281.1 → 3281.1.1
51n5e8gymn51n5:164-750Proton_antipo_M3281 → 3281.1 → 3281.1.1
52N5e8gymN51N5:164-750Proton_antipo_M3281 → 3281.1 → 3281.1.1
53qae8gymqa1qa:68-289309.1.1.0309 → 309.1 → 309.1.1
54qae8gymqa2qa:290-479Peptidase_M16_C309 → 309.1 → 309.1.1
55qAe8gymqA1qA:68-289309.1.1.0309 → 309.1 → 309.1.1
56qAe8gymqA2qA:290-479Peptidase_M16_C309 → 309.1 → 309.1.1
57Qae8gymQa1Qa:68-289309.1.1.0309 → 309.1 → 309.1.1
58Qae8gymQa2Qa:290-479Peptidase_M16_C309 → 309.1 → 309.1.1
59QAe8gymQA1QA:68-289309.1.1.0309 → 309.1 → 309.1.1
60QAe8gymQA2QA:290-479Peptidase_M16_C309 → 309.1 → 309.1.1
61qbe8gymqb1qb:284-513309.1.1.0309 → 309.1 → 309.1.1
62qbe8gymqb2qb:57-283Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
63qBe8gymqB1qB:57-284Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
64qBe8gymqB2qB:285-513309.1.1.0309 → 309.1 → 309.1.1
65Qbe8gymQb1Qb:57-284Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
66Qbe8gymQb2Qb:285-513309.1.1.0309 → 309.1 → 309.1.1
67QBe8gymQB1QB:57-284Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
68QBe8gymQB2QB:285-513309.1.1.0309 → 309.1 → 309.1.1
69qce8gymqc1qc:1-269Cytochrome_B5069 → 5069.1 → 5069.1.1
70qce8gymqc2qc:270-2875068.1.1.05068 → 5068.1 → 5068.1.1
71qCe8gymqC1qC:1-269Cytochrome_B5069 → 5069.1 → 5069.1.1
72qCe8gymqC2qC:270-2875068.1.1.05068 → 5068.1 → 5068.1.1
73Qce8gymQc1Qc:1-269Cytochrome_B5069 → 5069.1 → 5069.1.1
74Qce8gymQc2Qc:270-2875068.1.1.05068 → 5068.1 → 5068.1.1
75QCe8gymQC1QC:1-269Cytochrome_B5069 → 5069.1 → 5069.1.1
76QCe8gymQC2QC:270-2875068.1.1.05068 → 5068.1 → 5068.1.1
77qde8gymqd1qd:46-244Cytochrom_C1107 → 107.1 → 107.1.1
78qde8gymqd2qd:245-2745013.1.1.05013 → 5013.1 → 5013.1.1
79qDe8gymqD1qD:46-244Cytochrom_C1107 → 107.1 → 107.1.1
80qDe8gymqD2qD:245-2745013.1.1.05013 → 5013.1 → 5013.1.1
81Qde8gymQd1Qd:46-244Cytochrom_C1107 → 107.1 → 107.1.1
82Qde8gymQd2Qd:245-2745013.1.1.05013 → 5013.1 → 5013.1.1
83QDe8gymQD1QD:46-244Cytochrom_C1107 → 107.1 → 107.1.1
84QDe8gymQD2QD:245-2745013.1.1.05013 → 5013.1 → 5013.1.1
85qee8gymqe1qe:63-1255014.1.1.05014 → 5014.1 → 5014.1.1
86qee8gymqe2qe:126-238Rieske4294 → 4294.1 → 4294.1.1
87qEe8gymqE1qE:63-1255014.1.1.05014 → 5014.1 → 5014.1.1
88qEe8gymqE2qE:126-238Rieske4294 → 4294.1 → 4294.1.1
89Qee8gymQe1Qe:63-1255014.1.1.05014 → 5014.1 → 5014.1.1
90Qee8gymQe2Qe:126-238Rieske4294 → 4294.1 → 4294.1.1
91QEe8gymQE1QE:63-1255014.1.1.05014 → 5014.1 → 5014.1.1
92QEe8gymQE2QE:126-238Rieske4294 → 4294.1 → 4294.1.1
93qfe8gymqf1qf:8-87UCR_hinge5071 → 5071.1 → 5071.1.1
94qFe8gymqF1qF:2-90UCR_hinge5071 → 5071.1 → 5071.1.1
95Qfe8gymQf1Qf:8-87UCR_hinge5071 → 5071.1 → 5071.1.1
96QFe8gymQF1QF:2-90UCR_hinge5071 → 5071.1 → 5071.1.1
97s1e8gyms11s1:106-160NADH-G_4Fe-4S_35100 → 5100.1 → 5100.1.1
98s1e8gyms12s1:302-371,s1:517-718Molybdopterin,NADH_dhqG_C2003 → 2003.2 → 2003.2.1
99s1e8gyms13s1:372-516Molybdopterin2003 → 2003.2 → 2003.2.1
100s1e8gyms14s1:30-105Fer2_4221 → 221.1 → 221.1.1
101s1e8gyms15s1:161-241Nqo3_Fer4205 → 205.1 → 205.1.1
102s1e8gyms16s1:242-301NDSU1_4Fe-4S1001 → 1001.1 → 1001.1.1
103S1e8gymS11S1:30-105Fer2_4221 → 221.1 → 221.1.1
104S1e8gymS12S1:242-301NDSU1_4Fe-4S1001 → 1001.1 → 1001.1.1
105S1e8gymS13S1:302-371,S1:517-718Molybdopterin,NADH_dhqG_C2003 → 2003.2 → 2003.2.1
106S1e8gymS14S1:372-516Molybdopterin2003 → 2003.2 → 2003.2.1
107S1e8gymS15S1:106-160NADH-G_4Fe-4S_35100 → 5100.1 → 5100.1.1
108S1e8gymS16S1:161-241Nqo3_Fer4205 → 205.1 → 205.1.1
109s2e8gyms21s2:48-89,s2:252-253,s2:437-442244.4.1.0244 → 244.4 → 244.4.1
110s2e8gyms22s2:90-133,s2:364-436Complex1_49kDa244 → 244.4 → 244.4.1
111s2e8gyms23s2:134-251,s2:254-323,s2:352-363Complex1_49kDa244 → 244.4 → 244.4.1
112S2e8gymS21S2:48-89,S2:252-253,S2:437-442244.4.1.0244 → 244.4 → 244.4.1
113S2e8gymS22S2:90-133,S2:364-436Complex1_49kDa244 → 244.4 → 244.4.1
114S2e8gymS23S2:134-251,S2:254-323,S2:352-363Complex1_49kDa244 → 244.4 → 244.4.1
115s3e8gyms31s3:1-198Complex1_30kDa4272 → 4272.1 → 4272.1.1
116S3e8gymS31S3:1-198Complex1_30kDa4272 → 4272.1 → 4272.1.1
117s4e8gyms41s4:69-1853203.1.1.03203 → 3203.1 → 3203.1.1
118S4e8gymS41S4:69-1853203.1.1.03203 → 3203.1 → 3203.1.1
119s5e8gyms51s5:2-945071.2.1.05071 → 5071.2 → 5071.2.1
120S5e8gymS51S5:2-945071.2.1.05071 → 5071.2 → 5071.2.1
121s6e8gyms61s6:68-132375.1.8.0375 → 375.1 → 375.1.8
122S6e8gymS61S6:68-132375.1.8.0375 → 375.1 → 375.1.8
123s7e8gyms71s7:2-162Oxidored_q62007 → 2007.1 → 2007.1.3
124S7e8gymS71S7:2-162Oxidored_q62007 → 2007.1 → 2007.1.3
125s8e8gyms81s8:69-236205.1.1.0205 → 205.1 → 205.1.1
126S8e8gymS81S8:69-236205.1.1.0205 → 205.1 → 205.1.1
127sae8gymsa1sa:38-277,sa:407-493FAD_binding_22003 → 2003.1 → 2003.1.2
128sae8gymsa2sa:278-406FAD_binding_2278 → 278.1 → 278.1.1
129sae8gymsa3sa:494-636Succ_DH_flav_C604 → 604.2 → 604.2.1
130SAe8gymSA1SA:38-277,SA:407-493FAD_binding_22003 → 2003.1 → 2003.1.2
131SAe8gymSA2SA:494-636Succ_DH_flav_C604 → 604.2 → 604.2.1
132SAe8gymSA3SA:278-406FAD_binding_2278 → 278.1 → 278.1.1
133sbe8gymsb1sb:27-171Fer2_3221 → 221.1 → 221.1.1
134sbe8gymsb2sb:172-311187.1.1.0187 → 187.1 → 187.1.1
135SBe8gymSB1SB:27-171Fer2_3221 → 221.1 → 221.1.1
136SBe8gymSB2SB:172-311187.1.1.0187 → 187.1 → 187.1.1
137t1e8gymt11t1:203-468LpxB7512 → 7512.1 → 7512.1.1
138t1e8gymt12t1:14-202,t1:469-5157512.1.1.07512 → 7512.1 → 7512.1.1
139T1e8gymT11T1:203-477LpxB7512 → 7512.1 → 7512.1.1
140T1e8gymT12T1:14-210,T1:478-5157512.1.1.07512 → 7512.1 → 7512.1.1
141txe8gymtx1tx:23-166Thioredoxin2485 → 2485.1 → 2485.1.1
142TXe8gymTX1TX:23-166Thioredoxin2485 → 2485.1 → 2485.1.1
143v1e8gymv11v1:275-360SLBB_2221 → 221.1 → 221.1.4
144v1e8gymv12v1:361-471NADH_4Fe-4S633 → 633.11 → 633.11.1
145v1e8gymv13v1:30-274Complex1_51K4335 → 4335.1 → 4335.1.1
146V1e8gymV11V1:361-471NADH_4Fe-4S633 → 633.11 → 633.11.1
147V1e8gymV12V1:30-274Complex1_51K4335 → 4335.1 → 4335.1.1
148V1e8gymV13V1:275-360SLBB_2221 → 221.1 → 221.1.4
149v2e8gymv21v2:58-1462Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
150v2e8gymv22v2:147-2112Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
151V2e8gymV21V2:58-1462Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
152V2e8gymV22V2:147-2112Fe-2S_thioredx2485 → 2485.1 → 2485.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors