PDB 8GZG
ELECTRON MICROSCOPY0 chains26 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
4 domainsChain Eview chain
1 domainAll Domains (26)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8gzgA1 | A:50-175 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e8gzgA2 | A:3-49,A:176-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e8gzgB1 | B:3-49,B:172-226 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e8gzgB2 | B:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e8gzgC1 | C:955-1071 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 6 | C | e8gzgC2 | C:432-568 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 7 | C | e8gzgC3 | C:11-125,C:306-431 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 8 | C | e8gzgC4 | C:126-305 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 9 | C | e8gzgC5 | C:569-646 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 10 | C | e8gzgC6 | C:647-684,C:817-954 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 11 | C | e8gzgC7 | C:685-816 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | D | e8gzgD01 | D:1-44,D:82-83,D:121-188,D:224-386 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 13 | D | e8gzgD02 | D:387-420,D:464-545 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 14 | D | e8gzgD03 | D:421-463 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | D | e8gzgD04 | D:546-624 | 4959.1.1.0 | 4959 → 4959.1 → 4959.1.1 |
| 16 | E | e8gzgE1 | E:11-68 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 17 | F | e8gzgF1 | F:67-120,F:177-261 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 18 | F | e8gzgF2 | F:290-292,F:319-425 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 19 | F | e8gzgF3 | F:262-318 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 20 | Z | e8gzgZ01 | Z:-5-89,Z:362-365,Z:380-385,Z:390-392 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 21 | Z | e8gzgZ02 | Z:90-243,Z:249-253 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 22 | Z | e8gzgZ03 | Z:244-248,Z:254-331 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 23 | Z | e8gzgZ04 | Z:332-361,Z:366-379,Z:386-389,Z:393-402 | 4954.1.1.0 | 4954 → 4954.1 → 4954.1.1 |
| 24 | Z | e8gzgZ05 | Z:403-428 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 25 | Z | e8gzgZ06 | Z:974-1057 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 26 | Z | e8gzgZ07 | Z:1083-1228 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors